Results 181 to 190 of about 1,394,796 (266)

Clinical Information Extraction From Notes of Veterans With Lymphoid Malignancies: Natural Language Processing Study. [PDF]

JMIR Med Inform
He L, Moldenhauer MR, Zheng K, Ma H.
europepmc   +1 more source

Analysing the significance of small conformational changes and low occupancy states in serial crystallographic data

FEBS Open Bio, EarlyView.
This protocol paper outlines methods to establish the success of a time‐resolved serial crystallographic experiment, by means of statistical analysis of timepoint data in reciprocal space and models in real space. We show how to amplify the signal from excited states to visualise structural changes in successful experiments.
Jake Hill, Yelyzaveta Pulnova, Elke De Zitter, Helen M. Ginn, Briony A. Yorke   +4 more
wiley   +1 more source

Comparison of pipelines, seq2seq models, and LLMs for rare disease information extraction. [PDF]

Nat Lang Process Inf Syst
Gupta S, Ai X, Jiang Y, Kavuluru R.
europepmc   +1 more source

Long‐term hippocampal alterations and cognitive impairment in a murine model of surgical sepsis

FEBS Open Bio, EarlyView.
Using a mouse model of surgical sepsis, we tested long‐term memory and analyzed the transcriptome of single cells isolated from the hippocampus. Survivor mice showed worse memory, loss of certain brain cell subpopulations, and abnormal immune cell activity—suggesting that post‐sepsis brain alterations may be linked to cognitive deficits.
Dong Seong Cho, Rebecca Schmitt, Aneesha Dasgupta, Alexandra Ducharme, Jason Doles   +4 more
wiley   +1 more source

Leveraging open-source large language models for clinical information extraction in resource-constrained settings. [PDF]

JAMIA Open
Builtjes L, Bosma J, Prokop M, van Ginneken B, Hering A.   +4 more
europepmc   +1 more source

Information extraction and exclusivity [PDF]

Alberto Bisin, Danilo Guaitoli
openaire   +1 more source

Identifying gene expression signatures for risk stratification of postoperative adjuvant chemotherapy in colorectal cancer

FEBS Open Bio, EarlyView.
A novel signature integrating genome‐wide analysis with clinical factors predicts recurrence in stage II colorectal cancer and enables a new risk stratification to guide postoperative adjuvant chemotherapy. Clinical risk stratification for postoperative recurrence in patients with pathological stage II (pStage II) colorectal cancer (CRC) is essential ...
Mayuko Otomo, Keisuke Okuno, Shuichi Watanabe, Sakiko Oba, Hiroyasu Kagawa, Masanori Tokunaga, Daisuke Ban, Yusuke Kinugasa   +7 more
wiley   +1 more source

A software pipeline for medical information extraction with large language models, open source and suitable for oncology. [PDF]

NPJ Precis Oncol
Wiest IC, Wolf F, Leßmann ME, van Treeck M, Ferber D, Zhu J, Boehme H, Bressem KK, Ulrich H, Ebert MP, Kather JN.   +10 more
europepmc   +1 more source

YIPFα1A expression is regulated by multilayered molecular mechanisms

FEBS Open Bio, EarlyView.
YIPFα1A, a five‐pass Golgi protein, is regulated at multiple layers. (1) Rare‐codon enrichment drives translation‐coupled mRNA decay. (2) A proximal 3′‐UTR element stabilizes mRNA. (3) A distal 3′‐UTR element included by alternate poly(A) site usage represses translation, which can be overridden by the proximal 3′‐UTR element.
Tokio Takaji, Yurika Nakanishi, Nobuhiro Nakamura   +2 more
wiley   +1 more source

Large language model driven transferable key information extraction mechanism for nonstandardized tables. [PDF]

Sci Rep
Hu R, Yang Y, Liu S, Li Z, Liu J, Ding X, Sun H, Ren L.   +7 more
europepmc   +1 more source