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EasyKASP: a simple and fast tool for KASP primer design [PDF]

BMC Bioinformatics
Background Kompetitive Allele-Specific PCR (KASP) is a fluorescence-based, high-throughput and cost-effective genotyping technology widely used for detecting single nucleotide polymorphisms (SNPs) and insertion-deletions (InDels) across various species ...
Jian Zhang, Jingjing Yang, Changlong Wen
doaj   +4 more sources

KASP-IEva: an intelligent typing evaluation model for KASP primers

Frontiers in Plant Science
KASP marker technology has been used in molecular marker-assisted breeding because of its high efficiency and flexibility, and an intelligent evaluation model of KASP marker primer typing results is essential to improve the efficiency of marker ...
Xiaojing Chen, Xiaojing Chen, Longyu Huang, Longyu Huang, Longyu Huang, Jingchao Fan, Jingchao Fan, Shen Yan, Guomin Zhou, Guomin Zhou, Jianhua Zhang, Jianhua Zhang   +11 more
exaly   +5 more sources

Identification of Spike Length Gene and Development of KASP Markers in Wheat [PDF]

Plants
Spike length is a critical trait influencing the yield potential of wheat (Triticum aestivum L.). However, there has been limited research on spike-length-related genes in wheat.
Tiantian Jiang, Lingpeng Meng, Chao Ji, Zehui Wang, Huiwen Cao, Ruoxi Sun, Ke Xu, Xianghai Meng, Xueju Yang, Yong Zhao   +9 more
doaj   +4 more sources

KASP: a genotyping method to rapid identification of resistance in Plasmodium falciparum [PDF]

Malaria Journal, 2021
Background The emergence and spread of anti-malarial resistance continues to hinder malaria control. Plasmodium falciparum, the species that causes most human malaria cases and most deaths, has shown resistance to almost all known anti-malarials.
Ana Alvarez-Fernandez, María J. Bernal, Isabel Fradejas, Alexandra Martin Ramírez, Noor Azian Md Yusuf, Marta Lanza, Shamilah Hisam, Ana Pérez de Ayala, José M. Rubio   +8 more
doaj   +5 more sources

Developing KASP Markers for Identification of Basmati Rice Varieties [PDF]

Food Analytical Methods, 2020
AbstractAuthentication of Basmati rice has relied on microsatellite markers since 2004, but microsatellites cannot distinguish between all of the forty-one Basmati varieties approved in 2017. This study investigated whether single nucleotide polymorphisms (SNP) and insertion/deletion (InDel) variations developed into KASP™ (Kompetitive Allele Specific ...
Mark Quinton-Tulloch, Katherine Steele
exaly   +2 more sources

Development and validation of KASP markers for the milk traits genes in Kazakh horse

Journal of Applied Animal Research, 2020
There is an increasing demand for horse milk, but the current domestic performance of the horse milk has not yet conducted a systematic in-depth study. We carried out a pilot study on 13 single nucleotide polymorphisms (SNPs) located within five genes in
Wujun Liu
exaly   +2 more sources

Uncover the genetic basis of processing quality related traits in common wheat (Triticum aestivum L.) using genome-wide association mapping [PDF]

Frontiers in Plant Science
IntroductionImproving wheat processing quality is one of the primary objectives in modern wheat breeding. Among various wheat quality parameters, SDS sedimentation volume (SSV), test weight (TW), and water absorption rate (WAR), significantly influence ...
Quanhao Song, Wenwen Cui, Jiajing Song, Baoyuan Zhou, Liang Chen, Kaijie Xu, Yan Jin   +6 more
doaj   +2 more sources

Development of KASP markers, SNP fingerprinting and population structure analysis of Robinia pseudoacacia and its closely related species [PDF]

Frontiers in Plant Science
Robinia pseudoacacia is a deciduous arbor with significant ecological and economic values. However, the current method for germplasm identification using fingerprinting primarily relies on traditional SSR markers, which suffer from limited polymorphism ...
Haoran Wang, Ruixue Wang, Huizhong Zheng, Chunlei Zhao, Dekui Zang, Yan Ma, Fengqi Zang, Qichao Wu   +7 more
doaj   +2 more sources

Advantages of Amplifluor-like SNP markers over KASP in plant genotyping [PDF]

BMC Plant Biology, 2017
Background KASP (KBioscience Competitive Allele Specific PCR) and Amplifluor (Amplification with fluorescence) SNP markers are two prominent technologies based upon a shared identical Allele-specific PCR platform.
Satyvaldy Jatayev, Akhylbek Kurishbayev, Lyudmila Zotova, Gulmira Khasanova, Dauren Serikbay, Askar Zhubatkanov, Makpal Botayeva, Aibek Zhumalin, Arysgul Turbekova, Kathleen Soole, Peter Langridge, Yuri Shavrukov   +11 more
doaj   +4 more sources

Comparison of TaqMan, KASP and rhAmp SNP genotyping platforms in hexaploid wheat.

PLoS ONE, 2019
Advances in high-throughput genotyping enable the generation of genome-scale data much more easily and at lower cost than ever before. However, small-scale and cost-effective high-throughput single-nucleotide polymorphism (SNP) genotyping technologies ...
Habtamu Ayalew, Pak Wah Tsang, Chenggen Chu, Junzhou Wang, Shuyu Liu, Caifu Chen, Xue-Feng Ma   +6 more
doaj   +3 more sources