Results 171 to 180 of about 177,696 (251)

Significance of linkage disequilibrium and epistasis on genetic variances in noninbred and inbred populations. [PDF]

BMC Genomics, 2022
Viana JMS, Garcia AAF.
europepmc   +1 more source

gscramble: Simulation of Admixed Individuals Without Reuse of Genetic Material

Molecular Ecology Resources, Volume 25, Issue 4, May 2025.
ABSTRACT While a best practice for evaluating the behaviour of genetic clustering algorithms on empirical data is to conduct parallel analyses on simulated data, these types of simulation techniques often involve sampling genetic data with replacement.
Eric C. Anderson, Rachael M. Giglio, Matthew G. DeSaix, Timothy J. Smyser   +3 more
wiley   +1 more source

How to handle high subgenome sequence similarity in allopolyploid Fragaria x ananassa: linkage disequilibrium based variant filtering. [PDF]

BMC Genomics
Koorevaar T, Willemsen JH, Hildebrand D, Visser RGF, Arens P, Maliepaard C.   +5 more
europepmc   +1 more source

Evidence of epistasis in regions of long-range linkage disequilibrium across five complex diseases in the UK Biobank and eMERGE datasets. [PDF]

Am J Hum Genet, 2023
Singhal P, Veturi Y, Dudek SM, Lucas A, Frase A, van Steen K, Schrodi SJ, Fasel D, Weng C, Pendergrass R, Schaid DJ, Kullo IJ, Dikilitas O, Sleiman PMA, Hakonarson H, Moore JH, Williams SM, Ritchie MD, Verma SS.   +18 more
europepmc   +1 more source

Optimization and Evaluation of the bestRAD Sequencing Approach: Towards Ascertainment of the Invasion Routes of the Oriental Fruit Fly, Bactrocera dorsalis

Molecular Ecology Resources, EarlyView.
ABSTRACT The bestRAD technique is a reduced genome representation approach with high‐capacity sample multiplexing and physical isolation of biotin‐labelled target DNA fragments using streptavidin beads, which should reduce total cost and genotyping errors. While we here formalise the relevance of this approach within the HTS landscape, our foremost aim
Emeline Charbonnel, Laure Benoit, Sabine Nidelet, Enrique Ortega‐Abboud, Bernhard Gschloessl, Raphaël Leblois, David Ouvrard, Marie‐Pierre Chapuis   +7 more
wiley   +1 more source

Genomic exploration of Iranian almond (Prunus dulcis) germplasm: decoding diversity, population structure, and linkage disequilibrium through genotyping-by-sequencing analysis. [PDF]

BMC Genomics
Khojand S, Zeinalabedini M, Azizinezhad R, Imani A, Ghaffari MR.   +4 more
europepmc   +1 more source

Properties of 2-locus genealogies and linkage disequilibrium in temporally structured samples. [PDF]

Genetics, 2022
Biddanda A, Steinrücken M, Novembre J.
europepmc   +1 more source

Genetic insights into the effect of trace elements on cardiovascular diseases: multi-omics Mendelian randomization combined with linkage disequilibrium score regression analysis. [PDF]

Front Immunol
Chen B, Wang C, Li W.
europepmc   +1 more source

Impact of linkage disequilibrium heterogeneity along the genome on genomic prediction and heritability estimation. [PDF]

Genet Sel Evol, 2022
Ren D, Cai X, Lin Q, Ye H, Teng J, Li J, Ding X, Zhang Z.   +7 more
europepmc   +1 more source

Characterisation of linkage disequilibrium and subsequent estimation of effective population size in Thoroughbred horses using single nucleotide polymorphism markers [PDF]

, 2010
Bishop, S.C., Blott, S.C., Corbin, L.J., Swinburne, J.E., Vaudin, M., Woolliams, J.A.   +5 more
core   +1 more source