Results 61 to 70 of about 1,271,647 (216)

Multi-omic stock of surface ocean microbiome built by monthly, weekly and daily sampling in Dapeng Bay, China

Scientific Data
The coastal ocean is the dynamic interface where terrestrial, atmospheric, and marine systems converge, acting as a hotspot for microbial activity, which underpins the intricate web of carbon and nitrogen cycling.
Yanwei Chen, Siruo Chen, Jianchang Tao, Minxu Li, Wenxiu Wang, Mei Chen, Xiaochen Fang, Lingchao Kong, Yidong Wang, Olivier Pereira, Chuanlun Zhang   +10 more
doaj   +1 more source

Analysis of Carbohydrates and Glycoconjugates by Matrix‐Assisted Laser Desorption/Ionization Mass Spectrometry: An Update for 2023–2024

Mass Spectrometry Reviews, EarlyView.
ABSTRACT The use of MALDI mass spectrometry for the analysis of carbohydrates and glycoconjugates is a well‐established technique and this comprehensive review is the twelfth update of the original article published in 1999 and brings coverage of the literature to the end of 2024.
David J. Harvey
wiley   +1 more source

Archaea in organic-lean and organic-rich marine subsurface sediments: an environmental gradient reflected in distinct phylogenetic lineages

Frontiers in Microbiology, 2012
Examining the patterns of archaeal diversity in little-explored organic-lean marine subsurface sediments presents an opportunity to study the association of phylogenetic affiliation and habitat preference in uncultured marine Archaea.
Alan M Durbin, Andreas eTeske
doaj   +1 more source

Rethinking the tumor microbiome: Methodological challenges and a framework for rigorous research

mLife, EarlyView.
Abstract The intratumoral microbiome, as an essential component of the tumor microenvironment, has attracted increasing attention in recent years. The tumor microbiota displays an intricate interplay with its biological behaviors. However, emerging controversies, including the retraction of Poore et al.'s article, highlight significant challenges ...
Lingxuan Zhu, Zhixing Deng, Weiming Mou, Gengwen Deng, Hongyu Lu, Liling Xu, Shujia Lin, Hongsen Huang, Keren Wu, Qiheng Liang, Hao Li, Ziwen Zheng, Anqi Lin, Peng Luo   +13 more
wiley   +1 more source

Diversity and Spatial Distribution of Prokaryotic Communities Along A Sediment Vertical Profile of A Deep-Sea Mud Volcano Maria G. Pachiadaki & Argyri Kallionaki [PDF]

, 2011
We investigated the top 30-cm sediment prokaryotic community structure in 5-cm spatial resolution, at an active site of the Amsterdam mud volcano, East Mediterranean Sea, based on the 16S rRNA gene diversity.
Anke Dählmann, Gert J. De Lange, de Lange, G.J., Kallionaki, A., Konstantinos Ar. Kormas, Pachiadaki, M. G., Kormas, K.A., Dahlmann, A., De Lange, G. J., Kormas, K. A., Pachiadaki, M., Maria G. Pachiadaki, Argyri Kallionaki   +12 more
core   +1 more source

A comprehensive database for high-throughput identification of archaeal lipids using high-resolution mass spectrometry

Nature Communications
Archaeal membrane lipids are markedly distinct from those in bacteria and eukaryotes, serving as biomarkers for unraveling their ecological and biogeochemical roles.
Fengfeng Zheng, Wenyong Yao, Wei He, Wan Zhang, Yufei Chen, Huahui Chen, Zhirui Zeng, Xiao-Lei Liu, Su Ding, Yanhong Zheng, Linan Huang, Yuanqing Zhu, Chuanlun Zhang   +12 more
doaj   +1 more source

Basin Scale Variation on the Composition and Diversity of Archaea in the Pacific Ocean

Frontiers in Microbiology, 2017
The Archaea are a widely distributed group of prokaryotes that inhabit and thrive in many different environments. In the sea, they play key roles in various global biogeochemical processes.
Xiaomin Xia, Wang Guo, Hongbin Liu
doaj   +1 more source

A holistic genome dataset of bacteria, archaea and viruses of the Pearl River estuary

Scientific Data, 2022
Measurement(s) bacteria • Archaea • viruses Technology Type(s) Shotgun Sequencing Sample Characteristic - Organism estuary metagenome Sample Characteristic - Environment subtropical estuarine Sample Characteristic - Location Pearl river estuary Machine ...
Bu Xu, Fuyan Li, Lanlan Cai, Rui Zhang, Lu Fan, Chuanlun Zhang   +5 more
doaj   +1 more source

An (αβ)2 Architecture of the Arabidopsis thaliana tRNA Splicing Endonuclease Complex: Structural Modeling and Evolutionary Analyses

Proteins: Structure, Function, and Bioinformatics, EarlyView.
ABSTRACT The tRNA splicing endonuclease (TSEN) removes introns from precursor tRNAs (pre‐tRNAs) in eukaryotes and archaea, but the architecture and subunit organization of plant TSEN remain poorly defined. Here, we integrated in planta bimolecular fluorescence complementation (BiFC) assays with AlphaFold3 (AF3)‐based structural modeling, molecular ...
Mohammad Moniruzzaman, Markus Englert, Kazuhito Akama   +2 more
wiley   +1 more source

Isotopic Signature of N ₂ O Produced by Marine Ammonia-Oxidizing Archaea

, 2011
Archaea may account for the majority of marine nitrous oxide emissions to the atmosphere.
Alyson E. Santoro, Carolyn Buchwald, Karen L. Casciotti, Matthew R. McIlvin   +3 more
core   +1 more source