Results 1 to 10 of about 162,178 (247)
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph [PDF]
Bioinform., 2014 MEGAHIT is a NGS de novo assembler for assembling large and complex metagenomics data in a time- and cost-efficient manner. It finished assembling a soil metagenomics dataset with 252 Gbps in 44.1 and 99.6 h on a single computing node with and without a ...
Dinghua Li +4 more
semanticscholar +5 more sources
Nature reviews genetics, 2019 Clinical metagenomic next-generation sequencing (mNGS), the comprehensive analysis of microbial and host genetic material (DNA and RNA) in samples from patients, is rapidly moving from research to clinical laboratories. This emerging approach is changing
C. Chiu, Steve Miller
semanticscholar +3 more sources
Advances in Metagenomics and Its Application in Environmental Microorganisms
Frontiers in Microbiology, 2021 Metagenomics is a new approach to study microorganisms obtained from a specific environment by functional gene screening or sequencing analysis.
Lu Zhang, Mengjiao Xu, Wei Yi
exaly +2 more sources
Characterization of the Gut Microbiome Using 16S or Shotgun Metagenomics
Frontiers in Microbiology, 2016 The advent of next generation sequencing (NGS) has enabled investigations of the gut microbiome with unprecedented resolution and throughput. This has stimulated the development of sophisticated bioinformatics tools to analyze the massive amounts of data
Juan Jovel, Jordan Patterson, Dina Kao
exaly +2 more sources
subMG automates data submission for metagenomics studies [PDF]
BioData MiningBackground Publicly available metagenomics datasets are crucial for ensuring the reproducibility of scientific findings and supporting contemporary large-scale studies.
Tom Tubbesing +2 more
doaj +2 more sources
Microbiome, 2019 Background Mosquitoes are the most important invertebrate viral vectors in humans and harbor a high diversity of understudied viruses, which has been shown in many mosquito virome studies in recent years.
Chenyan Shi +7 more
doaj +2 more sources
Metagenomics: An Effective Approach for Exploring Microbial Diversity and Functions
Foods, 2023 Various fields have been identified in the “omics” era, such as genomics, proteomics, transcriptomics, metabolomics, phenomics, and metagenomics. Among these, metagenomics has enabled a significant increase in discoveries related to the microbial world ...
N. N. Nam +3 more
semanticscholar +1 more source
mSphere, 2020 The gastrointestinal microbiome plays an important role in limiting susceptibility to infection with Clostridioides difficile. To better understand the ecology of bacteria important for C.
Jennifer M. Auchtung +4 more
doaj +3 more sources
Characteristics of the Gut Bacterial Composition in People of Different Nationalities and Religions
Microorganisms, 2022 High-throughput sequencing has made it possible to extensively study the human gut microbiota. The links between the human gut microbiome and ethnicity, religion, and race remain rather poorly understood.
Mikhail Syromyatnikov +5 more
doaj +1 more source
Lower Genital Tract Microbiome in Early Pregnancy in the Eastern European Population
Microorganisms, 2022 Background: It is known that the features of the cervicovaginal microbiome can depend on ethnicity, which might be caused by genetic factors, as well as differences in diet and lifestyle.
Mariya Gryaznova +7 more
doaj +1 more source