Results 91 to 100 of about 173,789 (325)

Ratoon Season Rice Reduces Methane Emissions by Limiting Acetic Acid Transport to the Rhizosphere and Inhibiting Methanogens

open access: yesAdvanced Science, EarlyView.
This study finds that the interaction between ABA‐OsCIPK2‐OsSWEET1A reduces the allocation of methane producing bacteria carbon source (acetic acid) content to the rhizosphere soil of ratoon season rice, thereby reducing methane emissions. Abstract Rice paddies are a major, persistent source of atmospheric methane (CH4), emission rates depend on the ...
Jingnan Zou   +14 more
wiley   +1 more source

Structure and biosynthesis of carotenoids produced by a novel Planococcus sp. isolated from South Africa

open access: yesMicrobial Cell Factories, 2022
Background The genus Planococcus is comprised of halophilic bacteria generally reported for the production of carotenoid pigments and biosurfactants. In previous work, we showed that the culturing of the orange-pigmented Planococcus sp.
Anesu Conrad Moyo   +4 more
doaj   +1 more source

MetaEuk—sensitive, high-throughput gene discovery, and annotation for large-scale eukaryotic metagenomics

open access: yesMicrobiome, 2019
Metagenomics is revolutionizing the study of microorganisms and their involvement in biological, biomedical, and geochemical processes, allowing us to investigate by direct sequencing a tremendous diversity of organisms without the need for prior ...
Eli Levy Karin, M. Mirdita, J. Soeding
semanticscholar   +1 more source

Metatranscriptomes from diverse microbial communities: assessment of data reduction techniques for rigorous annotation [PDF]

open access: yes, 2014
Background Metatranscriptome sequence data can contain highly redundant sequences from diverse populations of microbes and so data reduction techniques are often applied before taxonomic and functional annotation.
Mock, Thomas   +3 more
core   +1 more source

Faecalibaculum rodentium Alleviates Ionizing Radiation‐Induced Damage in Mice by Improving Intestinal Integrity and Hematopoiesis via Its Metabolite Butyrate

open access: yesAdvanced Science, EarlyView.
The model shows the probiotics screening and underlying mechanisms of F. rodentiumn in alleviating IR‐induced tissue injury. Stress‐induced STAT3 mitochondria localization decreases F. rodentium abundance and butyrate concentration. Supplementation of F.
Hanyong Zhu   +17 more
wiley   +1 more source

The Gene Catalog and Comparative Analysis of Gut Microbiome of Big Cats Provide New Insights on Panthera Species

open access: yesFrontiers in Microbiology, 2020
Majority of metagenomic studies in the last decade have focused on revealing the gut microbiomes of humans, rodents, and ruminants; however, the gut microbiome and genic information (gene catalog) of large felids such as Panthera species are largely ...
Parul Mittal   +4 more
doaj   +1 more source

Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software

open access: yesNature Methods, 2017
Methods for assembly, taxonomic profiling and binning are key to interpreting metagenome data, but a lack of consensus about benchmarking complicates performance assessment.
A. Sczyrba   +66 more
semanticscholar   +1 more source

Metagenomics for taxonomy profiling: tools and approaches

open access: yesBioengineered, 2020
Statement of Retraction We have retracted the following article: Mukesh Kumar Awasthi, B. Ravindran, Surendra Sarsaiya, Hongyu Chen, Steven Wainaina, Ekta Singh, Tao Liu, Sunil Kumar, Ashok Pandey, Lal Singh & Zengqiang Zhang, “Metagenomics for taxonomy ...
Mukesh Kumar Awasthi   +10 more
semanticscholar   +1 more source

The gut microbiota and immune checkpoint inhibitors. [PDF]

open access: yes, 2018
Although immunotherapy has been remarkably effective across multiple cancer types, there continues to be a significant number of non-responding patients. A possible factor proposed to influence the efficacy of immunotherapies is the gut microbiome.
Daud, Adil, Humphries, Audrey
core   +1 more source

Soil Nutrient Enrichment Induces Trade‐Offs in Bacterial Life‐History Strategies Promoting Plant Productivity

open access: yesAdvanced Science, EarlyView.
Soil nutrient enrichment induces the trade‐offs between bacterial functional potential and growth‐rate potential. Such trade‐offs favor specific plant‐beneficial species and genes, playing a pivotal role in determining plant productivity. These findings enhance the understanding of the microbial responses in agroecosystems to ongoing global ...
Yuanyuan Yan   +5 more
wiley   +1 more source

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