Results 61 to 70 of about 173,789 (325)
BMC GenomicsBackground Parameters adversely affecting the contiguity and accuracy of the assemblies from Illumina next-generation sequencing (NGS) are well described.
Zoltán Rádai +7 more
doaj +1 more source
Frontiers in Microbiology, 2016 Plant growth promoting rhizobacteria produce chemical compounds with different benefits for the plant. Among them, HCN is recognized as a biocontrol agent, based on its ascribed toxicity against plant pathogens.
Tomaž Rijavec +4 more
doaj +1 more source
Metagenomics Approaches for Improving Food Safety.
Journal of Food Protection, 2021 Advancements in next-generation sequencing technology have dramatically reduced the cost and increased the ease of microbial whole-genome sequencing. This is revolutionizing the identification and analysis of foodborne microbial pathogens, facilitating ...
C. Billington, J. Kingsbury, L. Rivas
semanticscholar +1 more source
Metagenomics for Bacteriology [PDF]
, 2015 The study of bacteria, or bacteriology, has gone through transformative waves since its inception in the 1600s. It all started by the visualization of bacteria using light microscopy by Antonie van Leeuwenhoek, when he first described “animalcules ...
del Castillo, Erika, Izard, Jacques
core +1 more source
Unbiased taxonomic annotation of metagenomic samples [PDF]
, 2017 The classification of reads from a metagenomic sample using a reference taxonomy is usually based on first mapping the reads to the reference sequences and then, classifying each read at a node under the lowest common ancestor of the candidate sequences ...
Fosso, Bruno +3 more
core +1 more source
Rethinking plastic waste: innovations in enzymatic breakdown of oil‐based polyesters and bioplastics
FEBS Open Bio, EarlyView.Plastic pollution remains a critical environmental challenge, and current mechanical and chemical recycling methods are insufficient to achieve a fully circular economy. This review highlights recent breakthroughs in the enzymatic depolymerization of both oil‐derived polyesters and bioplastics, including high‐throughput protein engineering, de novo ...
Elena Rosini +2 more
wiley +1 more source
Pavian: interactive analysis of metagenomics data for microbiome studies and pathogen identification
Bioinform., 2019 SUMMARY Pavian is a web application for exploring classification results from metagenomics experiments. With Pavian, researchers can analyze, visualize, and transform results from various classifiers - such as Kraken, Centrifuge, and MethaPhlAn - using ...
F. Breitwieser, S. Salzberg
semanticscholar +1 more source
Complete genome sequence of bovine polyomavirus type 1 from aborted cattle, isolated in Belgium in 2014 [PDF]
, 2016 <p>The complete and fully annotated genome sequence of a bovine polyomavirus type 1 (BPyV/BEL/1/2014) from aborted cattle was assembled from a metagenomics data set. The 4,697-bp circular dsDNA genome contains 6 protein-coding genes.
Behaeghel, Isabelle +7 more
core +2 more sources
Relapsing–Remitting Multiple Sclerosis Is Associated With a Dysbiotic Oral Microbiome
Annals of Clinical and Translational Neurology, EarlyView.ABSTRACT Objective Multiple sclerosis (MS) is a chronic autoimmune disorder characterized by inflammation, demyelination, and neurological impairment. While the gut microbiota's role in MS is extensively studied, the association between the oral microbiota and MS remains underexplored, particularly in North American cohorts.
Sukirth M. Ganesan +12 more
wiley +1 more source
Metagenomic screening of the sugarcane virome in Florida. [P.36] [PDF]
, 2015 Viral metagenomics has revolutionized the way pathologists decipher viral diseases. While the impact of this new approach is still debatable in plant virus diagnostics, viral metagenomics has already produced key advances in viral ecology and has the ...
Comstock, Jack C. +5 more
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