Results 111 to 120 of about 4,218 (198)

Molecular assessment of complex microbial communities degrading long chain fatty acids in methanogenic bioreactors [PDF]

, 2007
Microbial diversity of anaerobic sludge after extended contact with long chain fatty acids (LCFA) was studied using molecular approaches. Samples containing high amounts of accumulated LCFA were obtained after continuous loading of two bioreactors ...
Alfons J.M. Stams, Altschul, Alves, Amann, Amann, Angelidaki, Angelidaki, Broughton, Casserly, Cole, Demeyer, Diana Z. Sousa, Elberson, Grosskopf, Hanaki, Hane, Hauke Smidt, Hedderich, Jackson, Jetten, Kendall, Kim, Koster, Lalman, Lalman, Lane, Leclerc, Ludwig, M. Alcina Pereira, M. Madalena Alves, Ma, Manz, McInerney, Muyzer, Nübel, Pereira, Pereira, Pereira, Pereira, Rinzema, Roest, Roy, Saitou, Sanguinetti, Sawayama, Schink, Stahl, Svetlitshnyi, Tagawa, Tay, Wallner, Weng, Wu, Yu, Yu, Zhang, Zhao, Zheng, Zoetendal   +58 more
core   +2 more sources

A snapshot love story: what serial crystallography has done and will do for us

Acta Crystallographica Section D, Volume 80, Issue 8, Page 563-579, August 2024.
This article gives an overview of current trends and challenges in serial crystallography, with a focus on results from time‐resolved experiments.Serial crystallography, born from groundbreaking experiments at the Linac Coherent Light Source in 2009, has evolved into a pivotal technique in structural biology.
Alessandra Henkel, Dominik Oberthür
wiley   +1 more source

Genetic, Biochemical, and Molecular Characterization of Methanosarcina barkeri Mutants Lacking Three Distinct Classes of Hydrogenase [PDF]

, 2018
The methanogenic archaeon Methanosarcina barkeri encodes three distinct types of hydrogenase, whose functions vary depending on the growth substrate. These include the F_(420)-dependent (Frh), methanophenazine-dependent (Vht), and ferredoxin-dependent ...
Kulkarni, Gargi, Mand, Thomas D., Metcalf, William W.   +2 more
core   +1 more source

Functional and structural characterization of the Methanosarcina mazei proteasome and PAN complexes

Journal of Structural Biology, 2006
We have cloned the proteasome and the proteasome activating nucleotidase (PAN) genes from the mesophilic archaeon Methanosarcina mazei and produced the respective proteins in Escherichia coli cultures. The recombinant complexes were purified to homogeneity and characterized biochemically, structurally, and by mass spectrometry.
Medalia, N., Sharon, M., Martinez-Arias, R., Mihalache, O., Robinson, C., Medalia, O., Zwickl, P.   +6 more
openaire   +4 more sources

Genome sequence of Acetomicrobium hydrogeniformans OS1 [PDF]

, 2018
Acetomicrobium hydrogeniformans, an obligate anaerobe of the phylum Synergistetes, was isolated from oil production water. It has the unusual ability to produce almost 4 molecules H2/molecule glucose. The draft genome of A.
Cook, Lauren E, Gang, Spencer S, Gunsalus, Robert P, Ihlan, Alicia, Lobos, Elizabeth A, Maune, Matthew, McInerney, Michael J, Tanner, Ralph S, Weinstock, George   +8 more
core   +2 more sources

Evaluation and optimization of PCR primers for selective and quantitative detection of marine ANME subclusters involved in sulfate-dependent anaerobic methane oxidation [PDF]

, 2017
Since the discovery that anaerobic methanotrophic archaea (ANME) are involved in the anaerobic oxidation of methane coupled to sulfate reduction in marine sediments, different primers and probes specifically targeting the 16S rRNA gene of these archaea ...
A Boetius, A Klindworth, A Miyashita, A Vigneron, Alfons J. M. Stams, AW Dale, B Orcutt, C Quast, Caroline M. Plugge, CS Martens, EO Omoregie, H Niemann, H. C. Aura Widjaja-Greefkes, HJ Mills, HJ Mills, I Roalkvam, I Roalkvam, K Knittel, K Yanagawa, KF Ettwig, MG Pachiadaki, MW Friedrich, Peer H. A. Timmers, PHA Timmers, PHA Timmers, PHA Timmers, PR Girguis, PR Girguis, PRO Barnett, R Laso-Pérez, RK Thauer, T Lösekann, T Nunoura, T Treude, VJ Orphan, VJ Orphan, W Ludwig, WS Reeburgh, WS Reeburgh   +38 more
core   +1 more source

The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes.

Journal of bacteriology, 2006
We report here a comparative analysis of the genome sequence of Methanosarcina barkeri with those of Methanosarcina acetivorans and Methanosarcina mazei. The genome of M. barkeri is distinguished by having an organization that is well conserved with respect to the other Methanosarcina spp.
Maeder, Dennis L., Anderson, Iain, Brettin, Thomas S., Bruce,David C., Gilna, Paul, Han, Cliff S., Lapidus, Alla, Metcalf, William W., Saunders, Elizabeth, Tapia, Roxanne, Sowers, Kevin R.   +10 more
openaire   +3 more sources

Genome-wide gene expression and RNA half-life measurements allow predictions of regulation and metabolic behavior in Methanosarcina acetivorans [PDF]

Metabolic Model and Maps. A zip file archive containing the iST807 metabolic model in the SBML format, an Excel spreadsheet including descriptions of the metabolic model and the metabolic map in formats compatible with Cytoscape and Escher.
Joseph R. Peterson, Lars Kohler, Petra R.A. Kohler, ShengShee Thor, William W. Metcalf, Zaida Luthey-Schulten   +5 more
core   +6 more sources

Crystal Structure of the Apo-Form of NADPH-Dependent Thioredoxin Reductase from a Methane-Producing Archaeon

Antioxidants, 2018
The redox regulation of proteins via reversible dithiol/disulfide exchange reactions involves the thioredoxin system, which is composed of a reductant, a thioredoxin reductase (TR), and thioredoxin (Trx).
Rubén M. Buey, Ruth A. Schmitz, Bob B. Buchanan, Monica Balsera   +3 more
doaj   +1 more source

Towards Reassignment of the Methionine Codon AUG to Two Different Noncanonical Amino Acids in Bacterial Translation

Croatica Chemica Acta, 2016
Genetic encoding of noncanonical amino acids (ncAAs) through sense codon reassignment is an efficient tool for expanding the chemical functionality of proteins. Incorporation of multiple ncAAs, however, is particularly challenging.
Alessandro De Simone, Carlos G. Acevedo-Rocha, Michael Georg Hoesl, Nediljko Budisa   +3 more
doaj   +1 more source