Results 61 to 70 of about 1,436 (176)

Comparative Genomics of Candidatus Methylomirabilis Species and Description of Ca. Methylomirabilis Lanthanidiphila

Frontiers in Microbiology, 2018
Methane is a potent greenhouse gas, which can be converted by microorganism at the expense of oxygen, nitrate, nitrite, metal-oxides or sulfate. The bacterium ‘Candidatus Methylomirabilis oxyfera,’ a member of the NC10 phylum, is capable of nitrite ...
Wouter Versantvoort, Simon Guerrero-Cruz, Daan R. Speth, Jeroen Frank, Jeroen Frank, Lavinia Gambelli, Geert Cremers, Theo van Alen, Mike S. M. Jetten, Mike S. M. Jetten, Mike S. M. Jetten, Boran Kartal, Huub J. M. Op den Camp, Joachim Reimann   +13 more
doaj   +1 more source

Fully Organic Agroforestry Practices in Rice Cultivation: Effects on Soil Bacterial Microbiota, Soil Health and Grain Quality

Journal of Sustainable Agriculture and Environment, Volume 5, Issue 2, June 2026.
ABSTRACT Introduction Sustainable practices are increasingly recognised for benefiting soil biodiversity, health, and overall grain quality. This study examined a unique rice agroecosystem adopting fully organic practices and agroforestry through a seasonal characterisation of soil bacterial microbiota and physicochemical parameters.
Martina Nasuelli, Irene Pellegrino, Maria Cavaletto, Giulia Ceravolo, Annalisa Givonetti, Alex Golinelli, Alessio Scarafoni, Fulvia Tambone, Elisa Bona   +8 more
wiley   +1 more source

Resistance and Recovery of Crop Productivity From Contrasted Soil Fertility

Earth's Future, Volume 14, Issue 6, June 2026.
Abstract The balance between crop production and environmental sustainability depends on an adequate supply of soil nutrients, although changes in nutrient supply may initially have little effect on crop production due to the buffering effects of soil nutrients and the overall resilience of the system.
Xue Tian, Rui Cao, Xinyuan Liu, Yue Li, Zhujun Wang, Chong Zhang, Xiaotong Song, Di Wu, Robert M. Rees, Klaus Butterbach‐Bahl, Xiaotang Ju   +10 more
wiley   +1 more source

The Elbe Estuary Microbiome Shifts With Salinity and Discharge and Depends on Fresh Organic Matter and Nutrient Availability

Environmental Microbiology Reports, Volume 18, Issue 3, June 2026.
Microbial diversity within the Elbe Estuary was found to be more strongly governed by seasonal variability, salinity, and discharge than by spatial heterogeneity. Oligohaline regions sustain high diversity, while nutrient and redox conditions drive functional shifts.
Vanessa Russnak, Raphael Koll, Sabine Keuter, Tina Sanders, Kirstin Dähnke   +4 more
wiley   +1 more source

Siderophore for Lanthanide and Iron Uptake for Methylotrophy and Plant Growth Promotion in Methylobacterium aquaticum Strain 22A [PDF]

, 2022
Methylobacterium and Methylorubrum species are facultative methylotrophic bacteria that are abundant in the plant phyllosphere. They have two methanol dehydrogenases, MxaF and XoxF, which are dependent on either calcium or lanthanides (Lns), respectively.
Tani, Akio, Sakai, Yasuyoshi, Oyama, Tokitaka, Juma, Patrick Otieno, Alessa, Ola, Fujitani, Yoshiko, Yurimoto, Hiroya   +6 more
core   +1 more source

The expanded diversity of methylophilaceae from Lake Washington through cultivation and genomic sequencing of novel ecotypes. [PDF]

PLoS ONE, 2014
We describe five novel Methylophilaceae ecotypes from a single ecological niche in Lake Washington, USA, and compare them to three previously described ecotypes, in terms of their phenotype and genome sequence divergence.
David A C Beck, Tami L McTaggart, Usanisa Setboonsarng, Alexey Vorobev, Marina G Kalyuzhnaya, Natalia Ivanova, Lynne Goodwin, Tanja Woyke, Mary E Lidstrom, Ludmila Chistoserdova   +9 more
doaj   +1 more source

Natural Selection in Synthetic Communities Highlights the Roles of Methylococcaceae and Methylophilaceae and Suggests Differential Roles for Alternative Methanol Dehydrogenases in Methane Consumption

Frontiers in Microbiology, 2017
We describe experiments that follow species dynamics and gene expression patterns in synthetic bacterial communities including species that compete for the single carbon substrate supplied, methane, and species unable to consume methane, which could only
Zheng Yu, David A. C. Beck, David A. C. Beck, Ludmila Chistoserdova   +3 more
doaj   +1 more source

From a Hetero- to a Methylotrophic Lifestyle: Flash Back on the Engineering Strategies to Create Synthetic Methanol-User Strains

Frontiers in Bioengineering and Biotechnology, 2022
Engineering microorganisms to grow on alternative feedstocks is crucial not just because of the indisputable biotechnological applications but also to deepen our understanding of microbial metabolism.
Camille Peiro, Cláudia M. Vicente, Denis Jallet, Stephanie Heux   +3 more
doaj   +1 more source

A Seasonal Record of Bacterial Communities in Micritized Carbonate Sediments of the Eastern Red Sea

Environmental Microbiology, Volume 28, Issue 5, May 2026.
Evidence of intense micritization is observed throughout Al Kharrar lagoon sediments (0–80 cm). Diverse bacterial communities with putative roles in carbonate cycling display depth‐related shifts. Their stable seasonal presence suggests sustained micritization beyond the photic zone, refining our understanding of the potential role of bacteria in early
Charlène Odobel, Elisa Garuglieri, Thomas Teillet, Ramona Marasco, Hachmann Kai Hachmann, Viswasanthi Chandra, Volker Vahrenkamp, Monica Sánchez‐Román, Daniele Daffonchio   +8 more
wiley   +1 more source

Comparative transcriptomics in three Methylophilaceae species uncover different strategies for environmental adaptation [PDF]

PeerJ, 2013
We carried out whole transcriptome analysis of three species of Methylophilaceae, Methylotenera mobilis, Methylotenera versatilis and Methylovorus glucosotrophus, in order to determine which metabolic pathways are actively transcribed in cultures grown ...
Alexey Vorobev, David A.C. Beck, Marina G. Kalyuzhnaya, Mary E. Lidstrom, Ludmila Chistoserdova   +4 more
doaj   +2 more sources