Integrating belowground bud bank dynamics into grassland monitoring and management
Adaptive Management of Grassland Ecosystems: A Bud Bank Perspective. Abstract Belowground bud banks are the core regenerative organs of perennial herbaceous plants, playing an irreplaceable role in population persistence, community assembly, and ecosystem restoration.
Zhiming Zhang, Zhigang Zhao, Kun Liu
wiley +1 more source
ExMODE: A comprehensive resource for extremophile genomic and functional exploration
ExMODE (https://db.genomics.cn/exmode/) integrates 3518 samples to build a unified extremophile resource, which hosts 1.35 billion habitat‐specific non‐redundant genes, 5.25 million representative protein structures, 67,026 metagenome‐assembled genomes (MAGs), and 164,132 biosynthetic gene clusters (BGCs). By combining sequence‐, structure‐, and genome‐
Denghui Li +30 more
wiley +1 more source
Extreme Salinity Change Governs Microbial Community Assembly and Interactions. [PDF]
Keneally C +7 more
europepmc +1 more source
Multi‐omics reveals gastrointestinal metabolic disorder‐induced diarrhea in postpartum dairy cows
Nutritional diarrhea is a pervasive, costly challenge in dairy production. Using integrated metagenomic and metabolomic profiling, we identified coordinated microbial and metabolic alterations across the rumen, hindgut, and serum. In the rumen, enrichment of Prevotella sp.
Weixuan Tang +7 more
wiley +1 more source
Stochastic Forces in Microbial Community Assembly: Founding Community Size Governs Divergent Ecological Trajectories. [PDF]
Hayashi I, Sánchez-Pinillos M, Toju H.
europepmc +1 more source
Shotgun metagenomics and culture‐based isolate genomics revealed position‐associated high‐risk antibiotic resistance genes (ARGs) signals across poultry manure piles and surrounding soils. Culture‐confirmed Enterobacteriaceae and IncHI2A‐related blaNDM‐5 plasmid backgrounds further highlight priority host‐ARG‐plasmid contexts for farm antimicrobial ...
Yaling Wang +5 more
wiley +1 more source
Nitrogen Sources Reshape Microbial Community Assembly and Interaction Networks to Regulate Straw Decomposition and Carbon Release in Cropland Soils of the North China Plain. [PDF]
Wang Y +6 more
europepmc +1 more source
Compared with the two herbivorous comparison species, pandas showed higher estimated oral‐source contributions and enrichment of microbial traits associated with facultative anaerobiosis, biofilm formation, and stress tolerance. These patterns are consistent with a model in which greater oral microbial input and putative host filtering may jointly ...
Lu Huang +7 more
wiley +1 more source
Microbial community assembly and pathogen signatures in groundwater and tap water systems in greater Cairo, Egypt. [PDF]
Rizk NM +8 more
europepmc +1 more source
Butyrate ameliorates acute‐on‐chronic liver failure by regulating macrophage polarization
Multi‐omics profiling identifies progressive microbiota‐metabolism‐immunity axis dysfunction in acute‐on‐chronic liver failure (ACLF), characterized by gut dysbiosis, reduced butyrate production, intestinal barrier disruption, microbial translocation, and pro‐inflammatory macrophage polarization, thereby exacerbating hepatic inflammation and fibrosis ...
Jing Xiao +10 more
wiley +1 more source

