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Microbial Predators Form a New Supergroup of Eukaryotes
Assembled transcriptomes, mitochondrial genomes, materials of orthogroup and phylogenetic analyses, individual gene alignments, concatenated and trimmed alignments, and maximum-likelihood and Bayesian tree files for the phylogenomic dataset for "Microbial predators form a new supergroup of eukaryotes".
Dmitry G Zagumyonnyi +2 more
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Microbial Eukaryotes: Extending Observations North [PDF]
Free-living microbial eukaryotes are an enigmatic group of organisms. Many have been discovered through traditional cultivation and microscopic observation, with continued observations leading to the acknowledgment that many small eukaryotic species are potentially dispersed at a global level (Finlay, 2002).
Jennifer F Biddle
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Single-cell transcriptomics for microbial eukaryotes [PDF]
One of the greatest hindrances to a comprehensive understanding of microbial genomics, cell biology, ecology, and evolution is that most microbial life is not in culture. Solutions to this problem have mainly focused on whole-community surveys like metagenomics, but these analyses inevitably loose information and present particular challenges for ...
Kolisko M +4 more
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The ecology and diversity of microbial eukaryotes in geothermal springs [PDF]
Abstract Decades of research into the Bacteria and Archaea living in geothermal spring ecosystems have yielded great insight into the diversity of life and organismal adaptations to extreme environmental conditions. Surprisingly, while microbial eukaryotes (protists) are also ubiquitous in many environments, their diversity across ...
Angela M Oliverio +5 more
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The Rise of Epigenetics in Microbial Eukaryotes [PDF]
The 12th European Conference on Fungal Genetics (ECFG) was held in Seville, Spain on March 23-27, 2014. The meeting covered topics as diverse as fungal genetics, genomics, molecular cell biology, evolution, pathogenesis, and biotechnology. Despite such diversity, as the meeting progressed, it became evident that epigenetics are now an important part of
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Patterns of Rare and Abundant Marine Microbial Eukaryotes [PDF]
Biological communities are normally composed of a few abundant and many rare species. This pattern is particularly prominent in microbial communities, in which most constituent taxa are usually extremely rare. Although abundant and rare subcommunities may present intrinsic characteristics that could be crucial for understanding community dynamics and ...
Logares, Ramiro +28 more
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Investigating the pangenomes of microbial eukaryotes
Pangenomes evolve in prokaryotes as a result of promiscuous horizontal transfer of genetic material and other rapid evolutionary processes. Although eukaryotes are generally under more restrictive evolutionary constraints than prokaryotes (e.g. lower levels of HGT), pangenomic structure has also been identified in plant, algal and fungal species.
Charley McCarthy, David Fitzpatrick
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Time to regulate microbial eukaryote nomenclature [PDF]
Nomenclature of microbial eukaryotes has been historically relegated to secondary importance. This is a legacy of the traditional classification of life into the most studied multicellular forms (plants fungi and animals). Despite the revolution in an understanding of eukaryotic diversity and relationships that has been achieved as a result of the use ...
Lahr, Daniel J. G. +2 more
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Communities of microbial eukaryotes in the mammalian gut within the context of environmental eukaryotic diversity [PDF]
Eukaryotic microbes (protists) residing in the vertebrate gut influence host health and disease, but their diversity and distribution in healthy hosts is poorly understood. Protists found in the gut are typically considered parasites, but many are commensal and some are beneficial.
Parfrey, Laura Wegener +12 more
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Quantifying long‐term recurrence in planktonic microbial eukaryotes
AbstractHow much temporal recurrence is present in microbial assemblages is still an unanswered ecological question. Even though marked seasonal changes have been reported for whole microbial communities, less is known on the dynamics and seasonality of individual taxa.
Caterina R. Giner +8 more
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