Microbial Eukaryotes Associated With Sediments in Deep-Sea Cold Seeps [PDF]
Frontiers in Microbiology, 2021 Microbial eukaryotes are key components of the marine food web, but their distribution in deep-sea chemosynthetic ecosystems has not been well studied. Here, high-throughput sequencing of the 18S rRNA gene and network analysis were applied to investigate
Hongmei Jing, Ning Huang, Yue Zhang
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Accurate and sensitive detection of microbial eukaryotes from whole metagenome shotgun sequencing [PDF]
Microbiome, 2021 Background Microbial eukaryotes are found alongside bacteria and archaea in natural microbial systems, including host-associated microbiomes. While microbial eukaryotes are critical to these communities, they are challenging to study with shotgun ...
Abigaïl Lind +2 more
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Metagenomic discovery of microbial eukaryotes in stool microbiomes [PDF]
mBioHost-associated microbiota form complex microbial communities that are increasingly associated with host behavior and disease. While these microbes include bacterial, archaeal, viral, and eukaryotic constituents, most studies have focused on bacteria due
Audra L. Crouch +5 more
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Microbial Eukaryotes: a Missing Link in Gut Microbiome Studies [PDF]
MSystems, 2018 Human-associated microbial communities include prokaryotic and eukaryotic organisms across high-level clades of the tree of life. While advances in high-throughput sequencing technology allow for the study of diverse lineages, the vast majority of ...
Marie-Claire Arrieta +1 more
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Vertical Distribution of Microbial Eukaryotes From Surface to the Hadal Zone of the Mariana Trench [PDF]
Frontiers in Microbiology, 2018 Marine microbial eukaryotes are ubiquitous, comprised of phylogenetically diverse groups and play key roles in microbial food webs and global biogeochemical cycling. However, their vertical distribution in the deep sea has received little attention.
Yong Jiang +2 more
exaly +4 more sources
Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard [PDF]
Frontiers in Microbiology, 2017 Microbial eukaryotes can play prominent roles in the Arctic marine ecosystem, but their diversity and variability is not well known in the ice-covered ecosystems.
Tove M Gabrielsen +2 more
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Microbial eukaryotes: Extending observations North [PDF]
Frontiers in Microbiology, 2013 Free-living microbial eukaryotes are an enigmatic group of organisms. Many have been discovered through traditional cultivation and microscopic observation, with continued observations leading to the acknowledgment that many small eukaryotic species are potentially dispersed at a global level (Finlay, 2002).
Jennifer F Biddle
doaj +3 more sources
DNA extraction bias is more pronounced for microbial eukaryotes than for prokaryotes [PDF]
MicrobiologyOpen, 2022 DNA extraction and preservation bias is a recurring topic in DNA sequencing‐based microbial ecology. The different methodologies can lead to distinct outcomes, which has been demonstrated especially in studies investigating prokaryotic community ...
Anne Brauer, Mia M. Bengtsson
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A single-cell genomics pipeline for environmental microbial eukaryotes [PDF]
iScience, 2021 Summary: Single-cell sequencing of environmental microorganisms is an essential component of the microbial ecology toolkit. However, large-scale targeted single-cell sequencing for the whole-genome recovery of uncultivated eukaryotes is lagging.
Doina Ciobanu +21 more
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Genetic Diversity, Community Assembly, and Shaping Factors of Benthic Microbial Eukaryotes in Dongshan Bay, Southeast China [PDF]
Frontiers in Microbiology, 2020 Microbial eukaryotes are pivotal components of marine ecosystems. However, compared with the pelagic environments, the diversity distribution and the driving mechanisms of microbial eukaryotes in the marine sediments have rarely been explored.
Rong Gu +14 more
doaj +2 more sources