Results 11 to 20 of about 720,693 (225)

Genetic Diversity of Microbial Eukaryotes in the Pelagic and Littoral Zones of Lake Taihu, China [PDF]

E3S Web of Conferences, 2019
Genetic diversity of microbial eukaryotes (0.8-20 μm) and its seasonal variation in the pelagic and littoral zones were investigated from in Meiliang Bay of Lake Taihu in China. The water samples were collected in four seasons (February, May, August, and
Zhao Biying, Chen Feizhou
doaj   +2 more sources

A single-cell genomics pipeline for environmental microbial eukaryotes [PDF]

iScience, 2021
Summary: Single-cell sequencing of environmental microorganisms is an essential component of the microbial ecology toolkit. However, large-scale targeted single-cell sequencing for the whole-genome recovery of uncultivated eukaryotes is lagging.
Doina Ciobanu, Alicia Clum, Steven Ahrendt, William B. Andreopoulos, Asaf Salamov, Sandy Chan, C. Alisha Quandt, Brian Foster, Jan P. Meier-Kolthoff, Yung Tsu Tang, Patrick Schwientek, Gerald L. Benny, Matthew E. Smith, Diane Bauer, Shweta Deshpande, Kerrie Barry, Alex Copeland, Steven W. Singer, Tanja Woyke, Igor V. Grigoriev, Timothy Y. James, Jan-Fang Cheng   +21 more
doaj   +2 more sources

Diversity and dynamics of active microbial eukaryotes in the anoxic zone of a freshwater meromictic lake (Pavin, France) [PDF]

Frontiers in Microbiology, 2016
Microbial eukaryotes play a crucial role in ecosystem functioning and oxygen is considered to be one of the strongest barriers against their local dispersal.
CECILE eLEPERE, Isabelle eDomaizon, Mylene eHugoni, AGNES eVELLET, Didier eDEBROAS   +4 more
doaj   +3 more sources

Missing microbial eukaryotes and misleading meta-omic conclusions [PDF]

Nature Communications
Meta-omics is commonly used for large-scale analyses of microbial eukaryotes, including species or taxonomic group distribution mapping, gene catalog construction, and inference on the functional roles and activities of microbial eukaryotes in situ. Here,
Arianna I. Krinos, Margaret Mars Brisbin, Sarah K. Hu, Natalie R. Cohen, Tatiana A. Rynearson, Michael J. Follows, Frederik Schulz, Harriet Alexander   +7 more
doaj   +2 more sources

DNA extraction bias is more pronounced for microbial eukaryotes than for prokaryotes [PDF]

MicrobiologyOpen, 2022
DNA extraction and preservation bias is a recurring topic in DNA sequencing‐based microbial ecology. The different methodologies can lead to distinct outcomes, which has been demonstrated especially in studies investigating prokaryotic community ...
Anne Brauer, Mia M. Bengtsson
doaj   +2 more sources

Metagenomic discovery of microbial eukaryotes in stool microbiomes

mBio
ABSTRACT Host-associated microbiota form complex microbial communities that are increasingly associated with host behavior and disease. While these microbes include bacterial, archaeal, viral, and eukaryotic constituents, most studies have focused on bacteria due to ...
Audra L. Crouch, Laine Monsey, Molly Rambeau, Cameron Ramos, Joseph M. Yracheta, Matthew Z. Anderson   +5 more
openaire   +4 more sources

Functional diversity of microbial eukaryotes in a meromictic lake: coupling between metatranscriptomic and a trait-based approach

, 2023
International audienceThe advent of high-throughput sequencing has led to the discovery of a considerable diversity of microbial eukaryotes in aquatic ecosystems, nevertheless the role of some of them (e.g.
Cruaud, Corinne, Gavory, Frédérick, Bronner, Gisèle, Courtine, Damien, Wawrzyniak, Ivan, Silva, Corinne, Da, Vellet, Agnès, Colombet, Jonathan, Billard, Hermine, Monjot, Arthur, Moné, Anne, Lepère, Cécile, Aury, Jean-Marc, Debroas, Didier   +13 more
core   +11 more sources

Microbial hierarchical correlations and their contributions to carbon-nitrogen cycling following a reservoir cyanobacterial bloom

Ecological Indicators, 2022
Unraveling how microbial co-occurrences respond to cyanobacterial blooms is central to our understanding of the stability of aquatic ecosystems. Here, we examined the effects of a Microcystis bloom on the inter-domain eukaryotic and two size-fractionated
Yuanyuan Xue, Min Liu, Huihuang Chen, Erik Jeppesen, Hongteng Zhang, Kexin Ren, Jun Yang   +6 more
doaj   +1 more source

Shift and Metabolic Potentials of Microbial Eukaryotic Communities Across the Full Depths of the Mariana Trench

Frontiers in Microbiology, 2021
Microbial eukaryotes are widespread and play important roles in marine ecosystems. However, their ecological characteristics in the deep sea (>1,000 m), especially hadal trenches, were largely unknown. Here, we investigated the diversity and metabolic
Xiao-Yu Zhu, Jiwen Liu, Jiwen Liu, Jiwen Liu, Chun-Xu Xue, Jiwei Tian, Xiao-Hua Zhang, Xiao-Hua Zhang, Xiao-Hua Zhang, Xiao-Hua Zhang   +9 more
doaj   +1 more source

Coordination and divergence in community assembly processes across co-occurring microbial groups separated by cell size

Frontiers in Microbiology, 2023
Setting the pace of life and constraining the role of members in food webs, body size can affect the structure and dynamics of communities across multiple scales of biological organization (e.g., from the individual to the ecosystem).
Xinghao Li, Xinghao Li, James C. Stegen, Yuhe Yu, Jie Huang   +4 more
doaj   +1 more source