Results 311 to 320 of about 120,736 (335)

MPS analysis of the mtDNA hypervariable regions on the MiSeq with improved enrichment

International Journal of Legal Medicine, 2017
The non-coding displacement (D) loop of the human mitochondrial (mt) genome contains two hypervariable regions known as HVR1 and HVR2 that are most often analyzed by forensic DNA laboratories. The massively parallel sequencing (MPS) protocol from Illumina (Human mtDNA D-Loop Hypervariable Region protocol) utilizes four sets of established PCR primer ...
Mitchell M, Holland, Laura A, Wilson, Sarah, Copeland, Gloria, Dimick, Charity A, Holland, Robert, Bever, Jennifer A, McElhoe   +6 more
openaire   +2 more sources

A method to generate multilocus barcodes of pinned insect specimens using MiSeq

Molecular Ecology Resources, 2020
AbstractFor molecular insect identification, amplicon sequencing methods are recommended because they offer a cost‐effective approach for targeting small sets of informative genes from multiple samples. In this context, high‐throughput multilocus amplicon sequencing has been achieved using the MiSeq Illumina sequencing platform.
Trace Akankunda, Hien To, Carlos Rodriguez Lopez, Remko Leijs, Katja Hogendoorn   +4 more
openaire   +3 more sources

Influence of elevated CO2 on arbuscular mycorrhizal fungal community elucidated using Illumina MiSeq platform in sub-humid tropical paddy soil

, 2020
Arbuscular mycorrhizal fungi (AMF) are one of the beneficial soil microbial communities, playing an important role in abiotic and biotic stress management in agricultural crops, including rice.
P. Panneerselvam, U. Kumar, A. Senapati, C. Parameswaran, A. Anandan, Anjani Kumar, Afrin Jahan, S. R. Padhy, A. Nayak   +8 more
semanticscholar   +1 more source

Next-Generation Bisulfite Sequencing Of Cacna1c With Illumina Miseq

European Neuropsychopharmacology, 2017
Background The complex etiology of psychiatric illness involves both genetic and environmental factors. The latter may act via epigenetic processes such as DNA methylation. Studies suggest that epigenetic regulation of gene expression may mediate the effects of early life experiences on adult behavior and susceptibility to psychiatric illness ...
Helene Dukal, Darja Schendel, Maren Lang, Maximilian Mossner, Johann-Christoph Jann, Josef Frank, Jens Treutlein, Stephanie Witt, Marcella Rietschel   +8 more
openaire   +1 more source

Illumina MiSeq based assessment of bacterial community structure and diversity along the heavy metal concentration gradient in Sukinda chromite mine area soils, India

, 2020
Using Illumina Miseq based 16S rRNA amplicon sequencing approach, the present study evaluated the influence of chromite mining on soil bacterial diversity and community structure in two in situ mine sites along with one chromite mine overburden soil and ...
S. K. Pradhan, N. Singh, U. Kumar, S. Mishra, R. C. Perumal, Jubina Benny, H. Thatoi   +6 more
semanticscholar   +1 more source

Analysis of bacterial and fungal communities by Illumina MiSeq platforms and characterization of Aspergillus cristatus in Fuzhuan brick tea

LWT, 2019
Fuzhuan brick tea (FBT) is an indigenous dark tea fermented by fungal and bacterial communities, and the special favor of FBT attributes to the actions of microbiota, while the correlation between bacteria and fungi attracts little attention.
Ying Rui, Peng Wan, Guijie Chen, Minhao Xie, Yi Sun, Xiaoxiong Zeng, Zhonghua Liu   +6 more
semanticscholar   +1 more source

Assessing the spatial and temporal variability of bacterial communities in two Bardenpho wastewater treatment systems via Illumina MiSeq sequencing.

Science of the Total Environment, 2019
Next generation sequencing provides new insights into the diversity and ecophysiology of bacteria communities throughout wastewater treatment plants (WWTP), as well as the fate of pathogens in wastewater treatment system.
J. Xue, Bradley W. Schmitz, K. Caton, Bowen Zhang, J. Zabaleta, J. Garai, Christopher M. Taylor, Tatiana Romanchishina, C. Gerba, I. Pepper, S. Sherchan   +10 more
semanticscholar   +1 more source

Bacterial Diversity in Pickled Cowpea (Vigna unguiculata [Linn.] Walp) as Determined by Illumina MiSeq Sequencing and Culture-Dependent Methods

Current Microbiology, 2021
Zhuang Guo, Yurong Wang, Fanshu Xiang, Q. Hou, Zhendong Zhang   +4 more
semanticscholar   +1 more source

Illumina MiSeq – primjena na Hrvatskom veterinarskom institutu

2023
Illumina MiSeq – primjena na Hrvatskom veterinarskom ...
openaire  

Miscanthus cultivation shapes rhizosphere microbial community structure and function as assessed by Illumina MiSeq sequencing combined with PICRUSt and FUNGUIld analyses

Archives of Microbiology, 2020
Yan Chen, Wei Tian, Y. Shao, Ying-Jun Li, Li-An Lin, Ying-Jun Zhang, Hui Han, Zhaojin Chen   +7 more
semanticscholar   +1 more source