Results 21 to 30 of about 7,256 (209)

Availability of Nanopore sequences in the genome taxonomy for Vibrionaceae systematics: Rumoiensis clade species as a test case [PDF]

open access: yesPeerJ, 2018
Whole genome sequence comparisons have become essential for establishing a robust scheme in bacterial taxonomy. To generalize this genome-based taxonomy, fast, reliable, and cost-effective genome sequencing methodologies are required.
Mami Tanaka   +4 more
doaj   +2 more sources

Multilocus sequence analysis for Leishmania braziliensis outbreak investigation. [PDF]

open access: yesPLoS Neglected Tropical Diseases, 2014
With the emergence of leishmaniasis in new regions around the world, molecular epidemiological methods with adequate discriminatory power, reproducibility, high throughput and inter-laboratory comparability are needed for outbreak investigation of this ...
Mariel A Marlow   +4 more
doaj   +1 more source

Prokaryotic taxonomy in the sequencing era and the role of MLSA in classification [PDF]

open access: yesMicrobiology Australia, 2011
The initial step in prokaryote species and genera descriptions is now largely based on the 16S rRNA gene sequencing approach followed often by a very restricted additional phenotypic characterisation of the representatives of the potential novel taxa.
Peter Kampfer, Stefanie P Glaeser
openaire   +1 more source

Multilocus sequence analysis for the taxonomic updating and identification of the genus Proteus and reclassification of Proteus genospecies 5 O’Hara et al. 2000, Proteus cibarius Hyun et al. 2016 as later heterotypic synonyms of Proteus terrae Behrendt et al. 2015

open access: yesBMC Microbiology, 2020
Background Members of the genus Proteus are mostly opportunistic pathogens that cause a variety of infections in humans. The molecular evolutionary characteristics and genetic relationships among Proteus species have not been elucidated to date.
Hang Dai   +6 more
doaj   +1 more source

Application of Whole Genome Sequencing and Pan-Family Multi-Locus Sequence Analysis to Characterize Relationships Within the Family Brucellaceae

open access: yesFrontiers in Microbiology, 2020
The bacterial family Brucellaceae is currently composed of seven genera, including species of the genus Brucella, a number of which are significant veterinary and zoonotic pathogens. The bacteriological identification of pathogenic Brucella spp.
Roland T. Ashford   +4 more
doaj   +1 more source

Identification of Vibrio cholerae and Vibrio mimicus by multilocus sequence analysis (MLSA) [PDF]

open access: yesINTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008
Vibrio cholerae and Vibrio mimicus have similar phenotypes and genomes making rapid differentiation of these two species difficult. The first standard multilocus sequence analysis (MLSA) scheme for the identification of these species is described. A collection of 45 representative isolates from different geographical regions and hosts was examined ...
Cristiane C, Thompson   +2 more
openaire   +2 more sources

Multilocus sequence analysis for the assessment of phylogenetic diversity and biogeography in hyphomonas bacteria from diverse marine environments. [PDF]

open access: yesPLoS ONE, 2014
Hyphomonas, a genus of budding, prosthecate bacteria, are primarily found in the marine environment. Seven type strains, and 35 strains from our collections of Hyphomonas, isolated from the Pacific Ocean, Atlantic Ocean, Arctic Ocean, South China Sea and
Chongping Li   +5 more
doaj   +1 more source

A Multilocus Sequence Analysis Scheme for Phylogeny of Thioclava Bacteria and Proposal of Two Novel Species

open access: yesFrontiers in Microbiology, 2017
A multilocus sequence analysis (MLSA) was established and performed on the genus Thioclava, including 23 strains isolated from diverse marine environments, with the aim of better differentiation of strains and species within this genus.
Yang Liu   +4 more
doaj   +1 more source

Mycobacterium abscessus multispacer sequence typing

open access: yesBMC Microbiology, 2013
Background Mycobacterium abscessus group includes antibiotic-resistant, opportunistic mycobacteria that are responsible for sporadic cases and outbreaks of cutaneous, pulmonary and disseminated infections.
Sassi Mohamed   +2 more
doaj   +1 more source

Multi-locus sequence analysis reveals great genetic diversity among Mycoplasma capricolum subsp. capripneumoniae strains in Asia

open access: yesVeterinary Research, 2022
Multi-Locus Sequence Analysis (MLSA) of Mycoplasma capricolum subsp. capripneumoniae (Mccp) strains from Asia revealed unforeseen diversity and a central position for genotyping groups representing strains from Central/East Asia, suggesting a possible ...
Arooba Akhtar   +8 more
doaj   +1 more source

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