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Molecular Docking

open access: yes
Molecular docking is a fundamental computational technique in modern drug discovery to predict molecular interactions between ligands and target protein receptors.
Vioni Yulianti
core   +13 more sources

Progress in molecular docking [PDF]

open access: yesQuantitative Biology, 2019
BackgroundIn recent years, since the molecular docking technique can greatly improve the efficiency and reduce the research cost, it has become a key tool in computer‐assisted drug design to predict the binding affinity and analyze the interactive mode.ResultsThis study introduces the key principles, procedures and the widely‐used applications for ...
Le Zhang
exaly   +2 more sources

Molecular Docking: Shifting Paradigms in Drug Discovery [PDF]

open access: yesInternational Journal of Molecular Sciences, 2019
Molecular docking is an established in silico structure-based method widely used in drug discovery. Docking enables the identification of novel compounds of therapeutic interest, predicting ligand-target interactions at a molecular level, or delineating ...
Luca Pinzi   +2 more
exaly   +3 more sources

Multipose Binding in Molecular Docking [PDF]

open access: yesInternational Journal of Molecular Sciences, 2014
Molecular docking has been extensively applied in virtual screening of small molecule libraries for lead identification and optimization. A necessary prerequisite for successful differentiation between active and non-active ligands is the accurate ...
Samsonov, Sergey A.   +7 more
core   +4 more sources

Combining Network Pharmacology, Molecular Docking, Molecular Dynamics Simulation, and Experimental Validation to Uncover the Efficacy and Mechanisms of Si-Miao-Yong-An Decoction in Diabetic Wound Healing

open access: yesJournal of Inflammation Research
Shujuan Zhang,1,* Yiming Shao,2,* Ranran Jin,2 Baodong Ma2 1Department of Laboratory Medicine, Zhengzhou Central Hospital Affiliated to Zhengzhou University, Zhengzhou, People’s Republic of China; 2Center of Stem Cell and Regenerative Medicine ...
Zhang S, Shao Y, Jin R, Ma B
doaj   +2 more sources

The Art and Science of Molecular Docking

open access: yesAnnual Review of Biochemistry
Molecular docking has become an essential part of a structural biologist's and medicinal chemist's toolkits. Given a chemical compound and the three-dimensional structure of a molecular target—for example, a protein—docking methods fit the compound into the target, predicting the compound's bound structure and binding energy.
Ron O Dror
exaly   +3 more sources

Molecular docking for predictive toxicology

open access: yes, 2018
Molecular docking is an in silico method widely applied in drug discovery programs to predict the binding mode of a given molecule interacting with a specific biological target.
Alberga, Domenico   +11 more
core   +4 more sources

N-acetylation of 2-aminobenzothiazoles with Acetic Acid for Evaluation of Antifungal Activity and In Silico Analysis

open access: yesJournal of Molecular Docking, 2021
Acetamides (S30A1 and S30) were synthesized from benzo[d]thiazol-2-amine and 6-nitrobenzo[d]thiazol-2-amine by direct use of acetic acid instead of acetylating agents.
Sukumar Bepary   +4 more
doaj   +1 more source

A Comparative Study of Approved Drugs for SARS-CoV-2 by Molecular Docking

open access: yesJournal of Molecular Docking, 2021
SARS-CoV-2, a new type of Coronavirus, has affected more millions of people worldwide. From the spread of this infection, many studies related to this virus and drug designing for the treatment have been started. Most of the studies target the SARS-CoV-2
Achal Mishra, Radhika Waghela
doaj   +1 more source

Comparative In-Silico Molecular Docking of Silymarin for SARS-CoV-2 Receptor

open access: yesJournal of Molecular Docking, 2022
COVID-19 pandemic has spread across the world in over 185 countries, with millions of infections and hundreds of thousands of deaths. The current pandemic has made the situation worse, forcing the development of better treatment.
Michael Antony Samy Amutha Gnana Arasi   +2 more
doaj   +1 more source

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