Results 1 to 10 of about 5,097,951 (211)

Comparing YAP^WW1 and TAZ^WW: Similar Binding Sites but Different Stability and Conformational Dynamics. [PDF]

Biomolecules
Merlen C, Mesrouze Y, Chau S, Diehl BA, Hinniger A, Zimmermann C, Meyerhofer M, Fontana P, Groebke S, Hinrichs J, Abdul Rahman W, Gutmann S, Fernández C, Petrović D, Chène P.   +14 more
europepmc   +1 more source

RinPy, a Python Package for Residue Interaction Network Model to Analyze Protein Structures and Predict Ligand Binding Sites. [PDF]

J Chem Inf Model
Sarica Z, Sungur FA, Kurkcuoglu O.
europepmc   +1 more source

TransPilot: mining key transcription factors by correlating binding sites with differentially expressed genes. [PDF]

Bioinform Adv
Tinghua H, Min Y, Fanghong Z, Siqi N, Jingchun W, Jianwu W, Ye Y, Xuejun G.   +7 more
europepmc   +1 more source

Targeting PTPN22 at Nonorthosteric Binding SitesA Fragment Approach. [PDF]

ACS Omega
Di Lello P, Wells MM, Davis B, Daniels Z, Garner TP, Gazzard L, Harris R, Hubbard RE, Landry ML, Martin B, Morgan JLW, Patapoff A, Simmonite H, Skelton N, Ultsch M, Walters BT, Wu P, Dimitrova YN, Huard K.   +18 more
europepmc   +1 more source

AF2BIND: predicting small-molecule binding sites using the pair representation of AlphaFold2. [PDF]

Nat Methods
Gazizov A, Lian A, Goverde C, Mou J, Ovchinnikov S, Polizzi NF.   +5 more
europepmc   +1 more source

Comparative Analysis of Transcription Factor Binding Sites in the Long Control Region Across Human Papillomavirus Types. [PDF]

Viruses
Bright D, Fuxman Bass JI.
europepmc   +1 more source

DeepPANB: integrating protein language model with PaiNN equivariant graph neural networks for prediction of protein-nucleic acid binding sites. [PDF]

Brief Bioinform
Zhang J, Wu Z, Su J, Zhang X, Li Y, Li Z, Li C.   +6 more
europepmc   +1 more source

Correction to: Master of Metals2: a graph neural network based architecture for the prediction of zinc binding sites in protein structures. [PDF]

Brief Bioinform
europepmc   +1 more source

Deep learning-driven <i>de novo</i> design of ribosome binding sites in <i>Paracoccus denitrificans</i>. [PDF]

Synth Syst Biotechnol
Zheng Z, Zhou S, Deng Y.
europepmc   +1 more source

Atomically Precise Engineering of Synergistic Binding Sites in a Zirconium Metal-Organic Framework for the Capture of Perfluorooctanoic Acid. [PDF]

J Am Chem Soc
Marugán-Benito S, Vlachos M, Ahrens L, Roselló-González M, Marini C, Prat Albert J, Mavrandonakis A, Loukopoulos E, Platero-Prats AE.   +8 more
europepmc   +1 more source