Results 21 to 30 of about 2,036,207 (293)

Fermionic Molecular Dynamics for nuclear dynamics and thermodynamics [PDF]

open access: yes, 2008
A new Fermionic Molecular Dynamics (FMD) model based on a Skyrme functional is proposed in this paper. After introducing the basic formalism, some first applications to nuclear structure and nuclear thermodynamics are presentedComment: 5 pages ...
Audi G.   +4 more
core   +10 more sources

Different NIPBL requirements of cohesin-STAG1 and cohesin-STAG2

open access: yesNature Communications, 2023
NIPBL is considered the cohesin loader. Here, the authors report that a drastic reduction of NIPBL levels reduces chromatin-bound cohesin-STAG2 genome wide while cohesin-STAG1 increases and can still be found at CTCF-bound sites but cannot form loops.
Dácil Alonso-Gil   +4 more
doaj   +1 more source

Mars, a molecule archive suite for reproducible analysis and reporting of single-molecule properties from bioimages

open access: yeseLife, 2022
The rapid development of new imaging approaches is generating larger and more complex datasets, revealing the time evolution of individual cells and biomolecules. Single-molecule techniques, in particular, provide access to rare intermediates in complex,
Nadia M Huisjes   +7 more
doaj   +1 more source

Fermionic Molecular Dynamics [PDF]

open access: yes, 1997
A quantum molecular model for fermions is investigated which works with antisymmetrized many-body states composed of localized single-particle wave packets.
Feldmeier, H., Schnack, J.
core   +3 more sources

Unbiased PCR-free spatio-temporal mapping of the mtDNA mutation spectrum reveals brain region-specific responses to replication instability

open access: yesBMC Biology, 2020
Background The accumulation of mtDNA mutations in different tissues from various mouse models has been widely studied especially in the context of mtDNA mutation-driven ageing but has been confounded by the inherent limitations of the most widely used ...
Emilie Kristine Bagge   +4 more
doaj   +1 more source

Pseudoatom molecular dynamics

open access: yesPhysical Review E, 2015
A new approach to simulating warm and hot dense matter that combines density functional theory based calculations of the electronic structure to classical molecular dynamics simulations with pair interaction potentials is presented. The new method, which we call pseudoatom molecular dynamics (PAMD), can be applied to single or multi-component plasmas ...
Starrett, C. E.   +2 more
openaire   +4 more sources

Phase changes in 38 atom Lennard-Jones clusters. II: A parallel tempering study of equilibrium and dynamic properties in the molecular dynamics and microcanonical [PDF]

open access: yes, 2000
We study the 38-atom Lennard-Jones cluster with parallel tempering Monte Carlo methods in the microcanonical and molecular dynamics ensembles. A new Monte Carlo algorithm is presented that samples rigorously the molecular dynamics ensemble for a system ...
Calvo, F.   +3 more
core   +3 more sources

Fermionic molecular dynamics [PDF]

open access: yesNuclear Physics A, 1989
Abstract A new type of molecular dynamics is proposed to solve approximately the many-body problem of interacting identical fermions with spin 1 2 . The interacting system is represented by an antisymmetrized many-body wave function consisting of single-particle states which are localized in phase space.
openaire   +1 more source

Molecular dynamics simulations [PDF]

open access: yesCurrent Biology, 1997
Originally the province of theorists only, molecular dynamics simulations are now accessible to a broad range of scientists. Advances in methodology, coupled with the development of fast and relatively inexpensive computer workstations, have increased the efficiency, accuracy, reliability, and applicability of these methods. Crossing important research
openaire   +2 more sources

Langevin molecular dynamics derived from Ehrenfest dynamics [PDF]

open access: yes, 2010
Stochastic Langevin molecular dynamics for nuclei is derived from the Ehrenfest Hamiltonian system (also called quantum classical molecular dynamics) in a Kac-Zwanzig setting, with the initial data for the electrons stochastically perturbed from the ...
Szepessy, Anders
core   +1 more source

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