Results 11 to 20 of about 602,983 (281)

Molecular Dynamics of Yukawa System using the Fast Multipole Method [PDF]

open access: yes, 2001
In order to perform the large-scale molecular dynamics simulation of the Yukawa system, a mathematical expression for molecular dynamics using the fast multipole method is described. The model simulations are also performed to test the performance of our
Kishimoto, Tokunari   +3 more
core   +1 more source

Molecular Dynamics Simulations [PDF]

open access: yes, 2008
Molecular simulation is a very powerful toolbox in modern molecular modeling, and enables us to follow and understand structure and dynamics with extreme detail--literally on scales where motion of individual atoms can be tracked. This chapter focuses on the two most commonly used methods, namely, energy minimization and molecular dynamics, that ...
  +6 more sources

Melting of metal nanowires: molecular dynamics simulation [PDF]

open access: yesФизико-химические аспекты изучения кластеров, наноструктур и наноматериалов, 2018
A comparative molecular dynamics study has been carried out of the melting of infinite metallic nanowires and free spherical metallic nanoparticles of the same diameter.
S.A. Vasilyev   +3 more
doaj   +1 more source

Molecular dynamics simulations [PDF]

open access: yesCurrent Biology, 1997
Originally the province of theorists only, molecular dynamics simulations are now accessible to a broad range of scientists. Advances in methodology, coupled with the development of fast and relatively inexpensive computer workstations, have increased the efficiency, accuracy, reliability, and applicability of these methods. Crossing important research
openaire   +2 more sources

Molecular Dynamics Simulation of Polymer-Metal Bonds [PDF]

open access: yes, 2008
Molecular simulation is becoming a very powerful tool for studying dynamic phenomena in materials. The simulation yields information about interaction at length and time scales unattainable by experimental measurements and unpredictable by continuum ...
Achenie L. E. K.   +7 more
core   +2 more sources

Surfactants Enhanced Heavy Oil–Solid Separation from Carbonate Asphalt Rocks-Experiment and Molecular Dynamic Simulation

open access: yesNanomaterials, 2021
In this study, surfactants were used to enhance heavy oil–solid separation, and a detailed mechanism was explored by SARA (saturates, aromatics, resins, asphaltenes) analysis, element analysis, AFM measurement, and molecular dynamic simulation ...
Jinjian Hou   +3 more
doaj   +1 more source

Investigation on volumetric properties of 1-butyl-3-methylimidazolium hexafluorophosphate ionic liquid, acetonitrile, and their mixture using molecular dynamics simulation [PDF]

open access: yesشیمی کاربردی روز, 2017
Molecular dynamics simulation is an appropriate method for microscpoic modeling of materials and is widely used in several fields of science and technology.
Amir Nasser Shamkhali   +1 more
doaj   +1 more source

Molecular Dynamics Simulation of Protein Biosurfactants

open access: yesColloids and Interfaces, 2018
Surfaces and interfaces are ubiquitous in nature and are involved in many biological processes. Due to this, natural organisms have evolved a number of methods to control interfacial and surface properties.
David L. Cheung, Suman Samantray
doaj   +1 more source

The inherent flexibility of receptor binding domains in SARS-CoV-2 spike protein

open access: yeseLife, 2022
Spike (S) protein is the primary antigenic target for neutralization and vaccine development for the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). It decorates the virus surface and undergoes large motions of its receptor binding domains (
Hisham M Dokainish   +5 more
doaj   +1 more source

Molecular Dynamics Simulation in Virus Research

open access: yesFrontiers in Microbiology, 2012
Virus replication in the host proceeds by chains of interactions between viral and host proteins. The interactions are deeply influenced by host immune molecules and anti-viral compounds, as well as by mutations in viral proteins. To understand how these
Hirotaka eOde   +8 more
doaj   +1 more source

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