Results 11 to 20 of about 7,932,784 (254)

Binding of SARS-CoV Covalent Non-Covalent Inhibitors to the SARS-CoV-2 Papain-Like Protease and Ovarian Tumor Domain Deubiquitinases

open access: yesBiomolecules, 2021
The urgent need for novel and effective drugs against the SARS-CoV-2 coronavirus pandemic has stimulated research worldwide. The Papain-like protease (PLpro), which is essential for viral replication, shares a similar active site structural architecture ...
Dakshinamurthy Sivakumar, Matthias Stein
doaj   +1 more source

Mononuclear manganese complexes as hydrogen evolving catalysts

open access: yesFrontiers in Chemistry, 2022
Molecular hydrogen (H2) is one of the pillars of future non-fossil energy supply. In the quest for alternative, non-precious metal catalysts for hydrogen generation to replace platinum, biological systems such as the enzyme hydrogenase serve as a ...
Vishakha Kaim   +3 more
doaj   +1 more source

Molecular dynamics simulations of liquid flow in and around carbon nanotubes [PDF]

open access: yes, 2010
Using recently-developed fluid state controllers [1], we apply continuum fluid boundary conditions to molecular dynamics (MD) simulations of liquid argon flow past a carbon nanotube (CNT) and through a CNT membrane. Advantages of this method are that it:
William D. Nicholls   +5 more
core   +4 more sources

Solid Phase and Stability Investigation of a Co-Crystal in the l-Valine/l-Leucine System

open access: yesCrystals, 2023
Some amino acid systems are known to exhibit solid solution and/or co-crystal behavior upon crystallization, which significantly affects their phase diagrams and complicates the design of their purification processes. Such behaviors are observed in the l-
Vico Tenberg   +2 more
doaj   +1 more source

Mechanism of Diiron Hydrogenase Complexes Controlled by Nature of Bridging Dithiolate Ligand

open access: yesChemistryOpen, 2022
Bio‐inorganic complexes inspired by hydrogenase enzymes are designed to catalyze the hydrogen evolution reaction (HER). A series of new diiron hydrogenase mimic complexes with one or two terminal tris(4‐methoxyphenyl)phosphine and different μ‐bridging ...
Dr. Mookan Natarajan   +4 more
doaj   +1 more source

Molecular Dynamics Simulations: Advances and Applications

open access: yesMolecules, 2022
Molecular dynamics (MD) simulations have led to great advances in many scientific disciplines, such as chemical physics, materials science, and biophysics [...]
Hugo A. L. Filipe, Luís M. S. Loura
doaj   +1 more source

Challenges for ab initio molecular dynamics simulations of electrochemical interfaces [PDF]

open access: yes, 2023
The modelling of electrochemical interfaces between a liquid electrolyte and an electrode from a quantum chemical perspective is typically done by performing ab initio molecular dynamics simulations.
Axel, Gross
core   +1 more source

Targeting N-Terminal Human Maltase-Glucoamylase to Unravel Possible Inhibitors Using Molecular Docking, Molecular Dynamics Simulations, and Adaptive Steered Molecular Dynamics Simulations

open access: yesFrontiers in Chemistry, 2021
There are multiple drugs for the treatment of type 2 diabetes, including traditional sulfonylureas biguanides, glinides, thiazolidinediones, α-glucosidase inhibitors, glucagon-like peptide-1 (GLP-1) receptor agonists, dipeptidyl peptidase IV (DPP-4 ...
Shitao Zhang   +6 more
doaj   +1 more source

Optimal bond-constraint topology for molecular dynamics simulations of cholesterol [PDF]

open access: yes, 2022
We recently observed artificial temperature gradients in molecular dynamics (MD) simulations of phase separating ternary lipid mixtures using the Martini 2 force field.
Balázs, Fábián   +2 more
core   +2 more sources

Study on the temperature dependence of the bulk modulus of polyisoprene by molecular dynamics simulations [PDF]

open access: yes, 2008
The temperature dependence of the bulk modulus of polyisoprene has been studied using molecular dynamics simulations. Virtual polyisoprenes have been submitted to volume contractions above and below the glass transition. Bulk modulus has been observed to
GILORMINI, Pierre   +2 more
core   +1 more source

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