Results 151 to 160 of about 723,948 (277)
TaxMan: a taxonomic database manager
BMC Bioinformatics, 2006 Background Phylogenetic analysis of large, multiple-gene datasets, assembled from public sequence databases, is rapidly becoming a popular way to approach difficult phylogenetic problems.
Blaxter Mark, Jones Martin
doaj +1 more source
Three new species of Apiospora (Amphisphaeriales, Apiosporaceae) in China [PDF]
MycoKeysChina is located in eastern Asia and has a large quantity and rich variety of bamboo resources. Bamboo resources also contain various fungal species such as Apiospora.
Kunmin Yu +3 more
doaj +3 more sources
Ranking top-k trees in tree-based phylogenetic networks [PDF]
arXiv, 2019 'Tree-based' phylogenetic networks proposed by Francis and Steel have attracted much attention of theoretical biologists in the last few years. At the heart of the definitions of tree-based phylogenetic networks is the notion of 'support trees', about which there are numerous algorithmic problems that are important for evolutionary data analysis ...
arxiv
A stable backbone for the fungi [PDF]
, 2009 Fungi are abundant in the biosphere. They have fascinated mankind as far as written history goes and have considerably influenced our culture. In biotechnology, cell biology, genetics, and life sciences in general fungi constitute relevant model ...
Anne Kupczok +7 more
core +1 more source
Impact of the Partitioning Scheme on Divergence Times Inferred from Mammalian Genomic Data Sets
Evolutionary Bioinformatics, 2012 Data partitioning has long been regarded as an important parameter for phylogenetic inference. The division of heterogeneous multigene data sets into partitions with similar substitution patterns is known to increase the performance of probabilistic ...
Carolina M. Voloch, Carlos G. Schrago
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No substitute for real data: phylogenies from birth-death polytomy resolvers should not be used for many downstream comparative analyses [PDF]
arXiv, 2015 The statistical estimation of phylogenies is always associated with uncertainty, and accommodating this uncertainty is an important component of modern phylogenetic comparative analysis. The birth-death polytomy resolver is a method of accounting for phylogenetic uncertainty that places missing (unsampled) taxa onto phylogenetic trees, using taxonomic ...
arxiv
An Annealed Sequential Monte Carlo Method for Bayesian Phylogenetics [PDF]
arXiv, 2018 We describe an "embarrassingly parallel" method for Bayesian phylogenetic inference, annealed Sequential Monte Carlo, based on recent advances in the Sequential Monte Carlo literature such as adaptive determination of annealing parameters. The algorithm provides an approximate posterior distribution over trees and evolutionary parameters as well as an ...
arxiv
Mycobiology, 2019 An 82-year-old man with diabetes was admitted to the emergency department with a third-degree burn on his left leg. The deep swab specimen from his left leg was cultured on Sabouraud dextrose agar without cycloheximide and incubated at 25 °C for 5 days ...
Ji-Hyun Park +4 more
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Identification, classification and phylogenetic analysis of bZIP proteins from Theobroma cacao for subsequent studies of resistance to witches' broom disease : S01P02 [PDF]
, 2013 Biotic and abiotic stresses are a major factor in decreased production of various cultures around the world. The culture of cacao (Theobroma cacao) has been suffering for many years with one of the diseases that most affect their crops, the witches ...
Almeida, D.S.M. +4 more
core
, 2016 Data blocks and their p-values assessed using Bayesian posterior prediction in PuMA. (DOCX 17 kb)
Tarasov, Sergei, Dimitrov, Dimitar
openaire +1 more source