Results 171 to 180 of about 998,588 (389)

Nanopore duplex sequencing as an alternative to Illumina MiSeq sequencing for eDNA-based biomonitoring of coastal aquaculture impacts

Metabarcoding and Metagenomics
Oxford Nanopore Technologies has recently launched a duplex sequencing strategy and announced an improved error rate which is in a similar order of magnitude as Illumina sequencing.
T. Stoeck, S. Katzenmeier, H. Breiner, Verena Rubel   +3 more
semanticscholar   +1 more source

Genetic Control of Tissue Remodeling by a Non‐Coding SNP in ITGA8 Explains Carotenoid‐Based Color Polymorphism in Marine Mollusks

Advanced Science, EarlyView.
In this study, the orange‐muscle giant abalone (Haliotis gigantea) is used as a model to identify a non‐coding SNP that disrupts the interaction between ITGA8 pre‐mRNA and the splicing factor ILF2, leading to altered ITGA8 splicing. These splicing changes promote carotenoid accumulation in abalone muscle through the regulation of tissue remodeling ...
Xiaohui Wei, Wenzhu Peng, Zekun Huang, Bingye Yang, Yiyu Wu, Minzhen Han, Yi Wang, Bingling Peng, Guosheng Hu, Jiawei Hong, Guijia Liu, Linwei Nie, Yang Gan, Miaoqin Huang, Xuan Luo, Weiwei You, Wen Liu, Caihuan Ke   +17 more
wiley   +1 more source

Additional file 3 of A high-quality de novo genome assembly based on nanopore sequencing of a wild-caught coconut rhinoceros beetle (Oryctes rhinoceros)

, 2022
Igor Filipović, Gordana Rašić, James Hereward, Maria Gharuka, Gregor J. Devine, Michael J. Furlong, Kayvan Etebari   +6 more
openalex   +1 more source

Nanopore Sequencing in Blood Diseases: A Wide Range of Opportunities [PDF]

, 2020
Crescenzio Francesco Minervini, Cosimo Cumbo, Paola Orsini, Luisa Anelli, Antonella Zagaria, Giorgina Specchia, Francesco Albano   +6 more
openalex   +1 more source

A Scalable Framework for Comprehensive Typing of Polymorphic Immune Genes from Long‐Read Data

Advanced Science, EarlyView.
SpecImmune introduces a unified computational framework optimized for long‐read sequencing to resolve over 400 highly polymorphic immune genes. This scalable approach achieves high‐resolution typing, enabling the discovery of cross‐family co‐evolutionary networks and population‐specific diversity.
Shuai Wang, Xuedong Wang, Mengyao Wang, Qian Zhou, Lusheng Wang, Shuai Cheng Li   +5 more
wiley   +1 more source

Nanopore Sequencing Technology in Oral Oncology: A Comprehensive Insight

, 2022
Shankargouda Patil, Dominic Augustine, SV Sowmya, Vanishri C. Haragannavar, Neethi Gujjar, Afrah Yousef, Suman Kashyap   +6 more
openalex   +1 more source

Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies. [PDF]

, 2019
Metagenomic sequence data from defined mock communities is crucial for the assessment of sequencing platform performance and downstream analyses, including assembly, binning and taxonomic assignment.
Bebout, Brad M, Cheng, Jan-Fang, Clum, Alicia, Copeland, Alex, Daum, Christopher, Detweiler, Angela M, Egan, Robert, Everroad, R Craig, Göker, Markus, Hundley, Hope, Klenk, Hans-Peter, Lee, Janey, Lee, Juna, Lindemann, Stephen R, Murray, Alison E, O'Malley, Ronan, Pett-Ridge, Jennifer, Sevim, Volkan, Singer, Esther, Woyke, Tanja, Zane, Matthew   +20 more
core  

Nanopore amplicon sequencing v2

, 2022
This protocol describes the step-by-step procedures for performing nanopore amplicon sequencing using the latest Kit 14 chemistry. The method is versatile and can be applied to a wide range of sequence-based analyses, including human microbiome profiling and biodiversity assessment using environmental DNA (eDNA metabarcoding).
openaire   +1 more source

2D Metal‐Organic Frameworks for High‐Performance Solid‐State Electrolytes: A Comprehensive Review

Advanced Science, EarlyView.
In this review, we elucidate the intrinsic advantages, synthetic methodologies, structural characteristics, ion‐transport mechanisms and performance optimization strategies while highlighting representative material systems and applications of 2D MOFs for electrolyte applications.
Changchun Ai, Yuan Tian, Yilei Shu, Peng Hang, Wentao Li, Yiling Yao, Huijuan Guo, Qun Yi, Hongmei Dai   +8 more
wiley   +1 more source

How does the efficiency of Nanopore compare to Illumina sequencing in tracking the spread of aquatic invasive species?

Water Biology and Security
eDNA-based methods offer a non-invasive, easy-to-use approach for monitoring aquatic biodiversity, particularly for tracking invasive or cryptic species.
Théo Deremarque, Rodolphe Elie Gozlan, Ravo Ravaozafindrasoa, Giuliano Mucci, Lucie Delalex, Jean-Michel Foissy, Michaël Cagnant, Mathieu Clair, Justina Givens, Fabienne Justy, Alice Valentini, Delphine Nicolas, Pascal Contournet, Claire Tetrel, Marc Thibault, Marine Combe   +15 more
doaj   +1 more source