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メタゲノムを利用したNCLDVの新規補助代謝遺伝子の探索

メタゲノムを利用したNCLDVの新規補助代謝遺伝子の探索
令和元年度 京都大学化学研究所 スーパーコンピュータシステム ...
openaire  

Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions

Nature Ecology & Evolution, 2020
H. Endo, Romain Blanc-Mathieu, Yanze Li, G. Salazar, N. Henry, K. Labadie, C. de Vargas, M. Sullivan, C. Bowler, P. Wincker, L. Karp‐Boss, S. Sunagawa, H. Ogata   +12 more
semanticscholar   +1 more source

Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms

Proceedings of the National Academy of Sciences of the United States of America, 2009
Mickaël Boyer, N. Yutin, Isabelle Pagnier, L. Barrassi, G. Fournous, L. Espinosa, C. Robert, S. Azza, Siyang Sun, M. Rossmann, M. Suzan-Monti, B. La Scola, E. Koonin, D. Raoult   +13 more
semanticscholar   +1 more source

Corrigendum: Genome and Environmental Activity of a Chrysochromulina parva Virus and Its Virophages

Frontiers in Microbiology, 2019
Joshua M. A. Stough, Natalya Yutin, Yuri V. Chaban, Mohammed Moniruzzaman, Eric R. Gann, Helena L. Pound, Morgan M. Steffen, Jenna N. Black, Eugene V. Koonin, Steven W. Wilhelm, Steven M. Short   +10 more
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Route of NCLDV evolution: the genomic accordion

Current Opinion in Virology, 2013
Nucleo cytoplasmic large DNA virus (NCLDV) superfamily forms a diverse group of viruses that infects a wide range of eukaryotic hosts (e.g. vertebrates, insects, protests, etc.). These viruses are characterized by a huge range in genome size (between 100kb and 1.2Mb), coupled with an extraordinary diverse genomic repertoire.
Jonathan Filee
exaly   +4 more sources

Étude des relations entre les virus géants de ‘NCLDV' grands virus nucléocytoplasmiques et Phytophthora parasitica INRA 310

La découverte de virus géants (GV) a bouleversé notre compréhension du monde des virus, et même redéfini le concept de virus. Acanthamoeba polyphaga mimivirus (APMV), leader des virus géants d'amibes a été découvert en 2003.Dans la première partie de ...
Sihem Hannat
semanticscholar   +2 more sources

Cellular and viral RNA polymerases: evolutionary insights into eukaryotic origins.

Trends in Microbiology
Nucleocytoplasmic large DNA viruses (NCLDVs) encode multi-subunit RNA polymerases (msRNAPs) that challenge conventional views of viral evolution. Phylogenetic and structural studies reveal that NCLDV RNAP catalytic cores share deep evolutionary roots ...
K. Y. Wong, Xiaoyuan Feng, Xiaojun Wang, Xiong Ji, Zhichao Zhou   +4 more
semanticscholar   +1 more source

Evolution of the Large Nucleocytoplasmic DNA Viruses of Eukaryotes and Convergent Origins of Viral Gigantism.

Advances in Virus Research, 2019
The Nucleocytoplasmic Large DNA Viruses (NCLDV) of eukaryotes (proposed order "Megavirales") comprise an expansive group of eukaryotic viruses that consists of the families Poxviridae, Asfarviridae, Iridoviridae, Ascoviridae, Phycodnaviridae ...
E. Koonin, N. Yutin
semanticscholar   +1 more source

Phylogenetic proximity is a key driver of temporal succession of marine giant viruses in a five-year metagenomic time-series

ISME Communications
Nucleocytoplasmic large DNA viruses (NCLDVs), also called giant viruses, are widespread in marine systems and infect a broad range of microbial eukaryotes (protists).
Sarah M. Laperriere, Benjamin Minch, J. L. Weissman, Shengwei Hou, Yi-Chun Yeh, J. C. Ignacio-Espinoza, N. Ahlgren, M. Moniruzzaman, J. Fuhrman   +8 more
semanticscholar   +1 more source

Co-occurrence patterns between Chlorophyta and nucleocytoplasmic large DNA virus in coastal ecosystem, South Korea.

Marine Environmental Research
Nucleocytoplasmic large DNA viruses (NCLDVs) are known to infect phytoplankton and play a significant role in regulating their population dynamics. In this study, we aimed to investigate the co-occurrence patterns between phytoplankton and NCLDVs in the ...
Min-Jeong Kim, K. Kim, Hyun-jung Kim, Yu Jin Kim, Taek-Kyun Lee, Seon Min Kim, Hyung-Gon Cha, Seung Won Jung   +7 more
semanticscholar   +1 more source