Results 41 to 50 of about 5,161,693 (301)

Network inference with hidden units

open access: yesMathematical Biosciences and Engineering, 2014
We derive learning rules for finding the connections between units in stochastic dynamical networks from the recorded history of a ``visible'' subset of the units. We consider two models. In both of them, the visible units are binary and stochastic. In one model the ``hidden'' units are continuous-valued, with sigmoidal activation functions, and in the
Tyrcha, Joanna, Hertz, John
openaire   +5 more sources

A systems‐level approach to mapping the telomere length maintenance gene circuitry

open access: yesMolecular Systems Biology, 2008
The ends of eukaryotic chromosomes are protected by telomeres, nucleoprotein structures that are essential for chromosomal stability and integrity. Understanding how telomere length is controlled has significant medical implications, especially in the ...
Rafi Shachar   +4 more
doaj   +1 more source

Transcriptome-Enabled Network Inference Revealed the GmCOL1 Feed-Forward Loop and Its Roles in Photoperiodic Flowering of Soybean

open access: yesFrontiers in Plant Science, 2019
Photoperiodic flowering, a plant response to seasonal photoperiod changes in the control of reproductive transition, is an important agronomic trait that has been a central target of crop domestication and modern breeding programs.
Faqiang Wu   +6 more
doaj   +1 more source

Minimal Interspecies Interaction Adjustment (MIIA): Inference of Neighbor-Dependent Interactions in Microbial Communities

open access: yesFrontiers in Microbiology, 2019
An intriguing aspect in microbial communities is that pairwise interactions can be influenced by neighboring species. This creates context dependencies for microbial interactions that are based on the functional composition of the community.
Hyun-Seob Song   +10 more
doaj   +1 more source

Improving gene regulatory network inference and assessment: The importance of using network structure

open access: yesFrontiers in Genetics, 2023
Gene regulatory networks are graph models representing cellular transcription events. Networks are far from complete due to time and resource consumption for experimental validation and curation of the interactions.
Juan M. Escorcia-Rodríguez   +9 more
doaj   +1 more source

Ensemble Inference and Inferability of Gene Regulatory Networks

open access: yesPLoS ONE, 2014
The inference of gene regulatory network (GRN) from gene expression data is an unsolved problem of great importance. This inference has been stated, though not proven, to be underdetermined implying that there could be many equivalent (indistinguishable) solutions. Motivated by this fundamental limitation, we have developed new framework and algorithm,
Ud-Dean Minhaz, Gunawan Rudiyanto
openaire   +7 more sources

Bridging the Loneliness Gap: Depression, Connectivity, and Isolation in Pediatric Oncology Patients and Their Peers

open access: yesPediatric Blood &Cancer, EarlyView.
ABSTRACT Background Loneliness is associated with adverse physical and mental health outcomes and remains understudied in children and adolescents undergoing cancer therapy. Pediatric oncology patients may be at increased risk due to medical isolation and disruption of social networks.
Charlotte N. Stahlfeld   +5 more
wiley   +1 more source

Bone Mineral Density After Contemporary Treatment for Acute Lymphoblastic Leukaemia: A Matched Cross‐Sectional Study

open access: yesPediatric Blood &Cancer, EarlyView.
ABSTRACT Background Reduced bone mineral density (BMD) has been reported in survivors of childhood and young adult acute lymphoblastic leukaemia (ALL); however, data from cohorts treated with contemporary protocols and including matched controls remain limited.
Karen Schow Jensen   +10 more
wiley   +1 more source

Exercise Capacity, Physical Activity, Fatigue, and Neurocognitive Function in Adult Survivors of Childhood Acute Lymphoblastic Leukemia

open access: yesPediatric Blood &Cancer, EarlyView.
ABSTRACT Background Adult survivors of childhood acute lymphoblastic leukemia (ALL) are at risk of reduced exercise capacity, decreased physical activity levels, persistent fatigue, and neurocognitive deficits. The aim was to investigate exercise capacity and physical activity levels of adult survivors of childhood ALL and their associations with ...
Laura Jess   +5 more
wiley   +1 more source

Non Parametric Distributed Inference in Sensor Networks Using Box Particles Messages [PDF]

open access: yes, 2014
This paper deals with the problem of inference in distributed systems where the probability model is stored in a distributed fashion. Graphical models provide powerful tools for modeling this kind of problems.
Haj Chhadé, Hiba   +15 more
core   +1 more source

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