Results 51 to 60 of about 606,212 (231)

Inference of Ecological Interaction Networks [PDF]

open access: yesAnnales Zoologici Fennici, 2008
To appear in Annales Zoologici ...
Vera-Licona, Paola   +1 more
openaire   +2 more sources

Phosphatidylinositol 4‐kinase as a target of pathogens—friend or foe?

open access: yesFEBS Letters, EarlyView.
This graphical summary illustrates the roles of phosphatidylinositol 4‐kinases (PI4Ks). PI4Ks regulate key cellular processes and can be hijacked by pathogens, such as viruses, bacteria and parasites, to support their intracellular replication. Their dual role as essential host enzymes and pathogen cofactors makes them promising drug targets.
Ana C. Mendes   +3 more
wiley   +1 more source

Gene-network inference by message passing

open access: yes, 2008
The inference of gene-regulatory processes from gene-expression data belongs to the major challenges of computational systems biology. Here we address the problem from a statistical-physics perspective and develop a message-passing algorithm which is ...
A Braunstein   +10 more
core   +2 more sources

Neural networks for inference, inference for neural networks

open access: yes, 2018
Bayesian statistics is a powerful framework for modeling the world and reasoning over uncertainty. It provides a principled method for representing our prior knowledge, and updating that knowledge in the light of new information. Traditional Bayesian statistics, however, has been limited to simple models.
openaire   +3 more sources

An upstream open reading frame regulates expression of the mitochondrial protein Slm35 and mitophagy flux

open access: yesFEBS Letters, EarlyView.
This study reveals how the mitochondrial protein Slm35 is regulated in Saccharomyces cerevisiae. The authors identify stress‐responsive DNA elements and two upstream open reading frames (uORFs) in the 5′ untranslated region of SLM35. One uORF restricts translation, and its mutation increases Slm35 protein levels and mitophagy.
Hernán Romo‐Casanueva   +5 more
wiley   +1 more source

Identification of Boolean Network Models From Time Series Data Incorporating Prior Knowledge

open access: yesFrontiers in Physiology, 2018
Motivation: Mathematical models take an important place in science and engineering. A model can help scientists to explain dynamic behavior of a system and to understand the functionality of system components.
Thomas Leifeld, Zhihua Zhang, Ping Zhang
doaj   +1 more source

Network Model Selection for Task-Focused Attributed Network Inference

open access: yes, 2017
Networks are models representing relationships between entities. Often these relationships are explicitly given, or we must learn a representation which generalizes and predicts observed behavior in underlying individual data (e.g. attributes or labels).
Berger-Wolf, Tanya Y.   +2 more
core   +1 more source

ASIAN: a website for network inference [PDF]

open access: yesBioinformatics, 2004
Abstract Summary: We constructed a website for inferring a network by applying the graphical Gaussian model, from a large amount of data, including redundant information. The available tools on the website are based on a system, named ASIAN (Automatic System for Inferring A Network), in combination with the two methods in our previous ...
Sachiyo Aburatani   +9 more
openaire   +2 more sources

Organ‐specific redox imbalances in spinal muscular atrophy mice are partially rescued by SMN antisense oligonucleotides

open access: yesFEBS Letters, EarlyView.
We identified a systemic, progressive loss of protein S‐glutathionylation—detected by nonreducing western blotting—alongside dysregulation of glutathione‐cycle enzymes in both neuronal and peripheral tissues of Taiwanese SMA mice. These alterations were partially rescued by SMN antisense oligonucleotide therapy, revealing persistent redox imbalance as ...
Sofia Vrettou, Brunhilde Wirth
wiley   +1 more source

Inference of Causal Networks Using a Topological Threshold

open access: yesIEEE Access
We propose a constraint-based algorithm, which automatically determines causal relevance thresholds, to infer causal networks from data. We call these topological thresholds.
Filipe Barroso   +2 more
doaj   +1 more source

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