Results 11 to 20 of about 62,716 (276)
GENOMIC AND PEDIGREE-BASED INBREEDING IN SLOVAK SPOTTED CATTLE
AGROFOR, 2019 The objective of this study was to evaluate the level of inbreeding in population ofSlovak Spotted cattle and to compare its genomic and pedigree-based estimates.The genomic data have been obtained from in total of 37 AI sires and 50 sire damsgenotyped by using Illumina BovineSNP50v2 BeadChip and ICBF InternationalDairy and Beef v3, respectively.
Radovan KASARDA +3 more
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Commonly used genomic estimators of individual inbreeding in livestock
Czech Journal of Animal Science: Management of inbreeding is one of the crucial parts of breeding programs in livestock populations. Traditionally, the inbreeding coefficient is calculated using pedigree data; however, it can also be estimated from genomic data.
Adrián Halvoník +3 more
doaj +2 more sources
Journal of Dairy Science: Breeders for many decades used pedigrees to limit increases in inbreeding, but genomic measures of relationship and inbreeding provide more precise control.
Juan P. Nani +3 more
doaj +3 more sources
purgeR: inbreeding and purging in pedigreed populations [PDF]
Bioinformatics, 2021 Abstract Summary Inbreeding depression and genetic purging are important processes shaping the survivability and evolution of small populations. However, detecting purging is challenging in practice, in part because there are limited tools dedicated to it.
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, 2017 Although the pedigree-based inbreeding coefficientFpredicts theexpectedproportion of an individual's genome that is identical-by-descent (IBD), heterozygosity at genetic markers captures Mendelian sampling variation and thereby provides an estimate ...
LF Keller (21877484) +6 more
core +6 more sources
Genetic diversity in Banija spotted pig: pedigree and microsatellite analyses [PDF]
Journal of Central European Agriculture, 2018 Genetic diversity and breed structure of Banija spotted pig (BS) was analyzed trough 721 pedigree records and polymorphism of 23 microsatellites on 30 BS pigs. Two phylogenetic trees were constructed from microsatellite and pedigree information.
Dubravko Škorput +9 more
doaj +1 more source
BMC Genomics, 2021 Background Although inbreeding caused by the mating of animals related through a recent common ancestor is expected to have more harmful effects on phenotypes than ancient inbreeding (old inbreeding), estimating these effects requires a clear definition ...
Pattarapol Sumreddee +5 more
doaj +1 more source
Inbreeding and litter size in pedigreed dogs
Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP), 2022 Inbreeding may negatively affect fertility, especially when mating closely related individuals. We evaluated the frequency of these matings in Dutch pedigreed dogs between 1997 to 2018 and their effect on litter size in 15 breeds. The percentage of matings between half-cousins and closer has decreased since 1999.
Windig, J.J. +2 more
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Estimating the prevalence of inbreeding from incomplete pedigrees [PDF]
Proceedings of the Royal Society of London. Series B: Biological Sciences, 2002 A previous review of inbreeding in natural populations suggested that close inbreeding (inbreeding coefficient f = 0.25) is generally rare in wild birds and mammals. However, the review did not assess rates of moderate inbreeding (f = 0.125), which may make a rather larger contribution to overall inbreeding in a population.
T C, Marshall +8 more
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Efficient genome ancestry inference in complex pedigrees with inbreeding [PDF]
Bioinformatics, 2010 Abstract Motivation: High-density SNP data of model animal resources provides opportunities for fine-resolution genetic variation studies. These genetic resources are generated through a variety of breeding schemes that involve multiple generations of matings derived from a set of founder animals.
Eric Yi Liu +4 more
openaire +2 more sources