Results 51 to 60 of about 1,347,393 (368)

SigTree: A Microbial Community Analysis Tool to Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree. [PDF]

open access: yes, 2017
Microbial community analysis experiments to assess the effect of a treatment intervention (or environmental change) on the relative abundance levels of multiple related microbial species (or operational taxonomic units) simultaneously using high ...
Ganesan, Balasubramanian   +4 more
core   +2 more sources

A Phylogenetic Analysis of the Family Dermatophilaceae [PDF]

open access: yesMicrobiology, 1983
The comparative analysis of the 16S ribosomal ribonucleic acid (rRNA) of Geodermatophilus obscurus DSM 43060 and Dermatophilus congolensis DSM 43037 revealed that these members of the family Dermatophilaceae were only remotely related. While G. obscurus represented an individual and separate line of descent within the phylogenetically defined order ...
Reiner M. Kroppenstedt   +2 more
openaire   +3 more sources

Complete chloroplast genome sequence of Liquidambar formosana, an ancient subtropical landscape plant to China

open access: yesMitochondrial DNA. Part B. Resources, 2020
Liquidambar formosana (Hamamelidaceae) is a tertiary relic species widely distributed in subtropical areas, and is a common endemic broad-leaved tree species in south China.
Yancai Shi, Huizhen Qin
doaj   +1 more source

The complete mitochondrial genome of Mactra quadrangularis (Mactridae)

open access: yesMitochondrial DNA. Part B. Resources, 2021
The whole mitochondrial genome sequence of Mactra quadrangularis (Reeve, 1854) was determined. It had a total length of 16,848 bp and it contained 12 protein coding genes, 2 ribosome RNA genes, and 22 transfer RNA genes. The base composition was 25.75% A,
Chen Guan   +7 more
doaj   +1 more source

On the Ancestral Compatibility of Two Phylogenetic Trees with Nested Taxa [PDF]

open access: yes, 2005
Compatibility of phylogenetic trees is the most important concept underlying widely-used methods for assessing the agreement of different phylogenetic trees with overlapping taxa and combining them into common supertrees to reveal the tree of life.
Llabres, Merce   +3 more
core   +4 more sources

The complete mitochondrial genome of Batocera rubus Linnaeus, 1785 (Coleoptera: Cerambycidae)

open access: yesMitochondrial DNA. Part B. Resources, 2023
Batocera rubus severely impacts on the health of banyan trees. In this study, the whole mitochondrial genome for B. rubus was found to be 16,158 bp with a GC content of 23.9%, including 39.1% A, 37.0% T, 14.8% C, and 9.1% G.
Rong Deng   +5 more
doaj   +1 more source

rbrothers: R Package for Bayesian Multiple Change-Point Recombination Detection. [PDF]

open access: yes, 2013
Phylogenetic recombination detection is a fundamental task in bioinformatics and evolutionary biology. Most of the computational tools developed to attack this important problem are not integrated into the growing suite of R packages for statistical ...
Chattopadhyay, Sujay   +3 more
core   +3 more sources

Characterization and phylogenetic analysis of the complete mitochondrial genome of a unique economic plant Lycium barbarum L.

open access: yesActa Societatis Botanicorum Poloniae, 2023
Lycium barbarum L. ( L. barbarum ), an important medicinal and food crop from the Solanaceae family, is known for excellent tolerance to saline–alkaline and drought stresses. Therefore, it has significant research and application value.
Cuiping Guan   +4 more
doaj   +1 more source

Genome-scale phylogenetic analysis finds extensive gene transfer among Fungi [PDF]

open access: yes, 2015
Although the role of lateral gene transfer is well recognized in the evolution of bacteria, it is generally assumed that it has had less influence among eukaryotes.
Boussau, Bastien   +4 more
core   +4 more sources

Phylogenetic Analysis of Trophic Associations

open access: yesThe American Naturalist, 2006
Ecologists frequently collect data on the patterns of association between adjacent trophic levels in the form of binary or quantitative food webs. Here, we develop statistical methods to estimate the roles of consumer and resource phylogenies in explaining patterns of consumer-resource association.
Ives, A, Godfray, H
openaire   +6 more sources

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