Results 11 to 20 of about 7,737,899 (379)

Refuting phylogenetic relationships [PDF]

Biology Direct, 2006
AbstractBackgroundPhylogenetic methods are philosophically grounded, and so can be philosophically biased in ways that limit explanatory power. This constitutes an important methodologic dimension not often taken into account. Here we address this dimension in the context of concatenation approaches to phylogeny.ResultsWe discuss some of the limits of ...
Bapteste Eric, Boucher Yan, Bucknam James   +2 more
openaire   +3 more sources

Phylogenetic relationships in the [PDF]

European Journal of Entomology, 2006
Phylogenetic relationships among Palaearctic Ribes and/or Onagraceae inhabiting Aphis species from five countries were examined using mitochondrial gene cytochrome oxidase I (CO-I) and nuclear gene elongation factor 1 α (EF-1α) sequences. There was no major conflict between the trees obtained from two data sets; nodes with strong bootstrap support from
Jurga TURČINAVIČIENĖ, Rimantas RAKAUSKAS, Bo Vest PEDERSEN   +2 more
openaire   +2 more sources

Phylogenetic relationships of 'Polyalthia' in Fiji [PDF]

PhytoKeys, 2020
The genus Polyalthia (Annonaceae) has undergone dramatic taxonomic changes in recent years. Nine Polyalthia species have historically been recognized in Fiji, all of which have subsequently been transferred to three different genera, viz. Goniothalamus, Huberantha and Meiogyne.
Bine Xue, Yanwen Chen, Richard M. K. Saunders   +2 more
openaire   +4 more sources

Phylogenetic relationships in the family Alloherpesviridae [PDF]

Diseases of Aquatic Organisms, 2009
Phylogenetic relationships among herpesviruses (HVs) of mammals, birds, and reptiles have been studied extensively, whereas those among other HVs are relatively unexplored. We have reconstructed the phylogenetic relationships among 13 fish and amphibian HVs using maximum likelihood and Bayesian analyses of amino acid sequences predicted from parts of ...
Waltzek, T.B., Kelley, G.O., Alfaro, M.E., Kurobe, T., Davison, A.J., Hedrick, R.P.   +5 more
openaire   +3 more sources

Complete mitochondrial genome of Limnophyes minimus (Diptera: Chironomidae)

Mitochondrial DNA. Part B. Resources, 2022
The complete mitochondrial genome of Limnophyes minimus (Meigen 1818) was sequenced and annotated, and its general features and base composition were analyzed.
Xiangliang Fang, Xintong Li, Tian Lu, Jun Fu, Mi Shen, Yunli Xiao, Yue Fu   +6 more
doaj   +1 more source

Complete mitochondrial genome of Chironomus nipponensis, new record from China (Diptera: Chironomidae)

Mitochondrial DNA. Part B. Resources, 2022
The complete mitochondrial genome of Chironomus nipponensis Tokunaga, was sequenced and assembled from the whole genome data. The mitochondrial genome length was 16184 bp and contained 22 transfer RNA genes, 13 protein-coding genes, 2 ribosomal RNA genes,
Mi Shen, Yufei Li, Yuping Yao, Yue Fu
doaj   +1 more source

Folding and unfolding phylogenetic trees and networks [PDF]

, 2015
Phylogenetic networks are rooted, labelled directed acyclic graphs which are commonly used to represent reticulate evolution. There is a close relationship between phylogenetic networks and multi-labelled trees (MUL-trees).
C Semple, D Gusfield, DH Huson, F Pardi, G Cardona, G Cardona, I Kanj, K Huber, Katharina T. Huber, L Iersel van, M Lott, Mike Steel, P Boldi, S Willson, T Marcussen, T Wu, Taoyang Wu, Vincent Moulton   +17 more
core   +2 more sources

Coalescent-based genome analyses resolve the early branches of the euarchontoglires [PDF]

, 2013
Despite numerous large-scale phylogenomic studies, certain parts of the mammalian tree are extraordinarily difficult to resolve. We used the coding regions from 19 completely sequenced genomes to study the relationships within the super-clade ...
A Criscuolo, Axel Janke, B Rannala, Björn M. Hallström, BM Hallström, BM Hallström, BM Hallström, BM Hallström, C Lanave, CA Russo, D Curnoe, DE Pumo, DE Wildman, DH Huson, G Churakov, G Jobb, H Shimodaira, H Shimodaira, Hans Ellegren, J Schmitz, JA van Dam, JC Avise, JE Janecka, JE McCormack, JFC Kingman, JH Degnan, JJ Fong, JO Kriegs, JP Townsend, K Katoh, KM Kjer, L Liu, L Liu, L Liu, LS Kubatko, M Dos Reis, MJ Novacek, MP Simmons, NM Jameson, PJ Waddell, RJ Asher, S Guindon, S Kumar, S Song, S Whelan, SV Edwards, TH Ogden, TK Seo, U Arnason, U Arnason, Vikas Kumar, WJ Murphy, WP Maddison   +52 more
core   +8 more sources

Complete mitochondrial genome of coconut hispine beetle Brontispa longissima (Coleoptera: Chrysomelidae: Cassidinae)

Mitochondrial DNA. Part B. Resources, 2020
In the present study, we determined complete mitogenome of Brontispa longissima, the first for the tribe Cryptonychini. This mitochondrial genome contains 15,696 bp, with an A+T content of 72.2% (GenBank accession no. MN052901).
Rui Meng, Su Ao, Wei Xu, Baoqian Lv, Bo Cai   +4 more
doaj   +1 more source

Herb-Induced Liver Injury: Phylogenetic Relationship, Structure-Toxicity Relationship, and Herb-Ingredient Network Analysis

International Journal of Molecular Sciences, 2019
Currently, hundreds of herbal products with potential hepatotoxicity were available in the literature. A comprehensive summary and analysis focused on these potential hepatotoxic herbal products may assist in understanding herb-induced liver injury (HILI)
Shuaibing He, Chenyang Zhang, P. Zhou, Xuelian Zhang, Tianyuan Ye, Ruiying Wang, Guibo Sun, Xiaobo Sun   +7 more
semanticscholar   +1 more source