Results 181 to 190 of about 2,043,845 (347)

Spatial Phylogenetics of Florida Vascular Plants: The Effects of Calibration and Uncertainty on Diversity Estimates

iScience, 2019
Summary: Recent availability of biodiversity data resources has enabled an unprecedented ability to estimate phylogenetically based biodiversity metrics over broad scales.
Julie M. Allen, Charlotte C. Germain-Aubrey, Narayani Barve, Kurt M. Neubig, Lucas C. Majure, Shawn W. Laffan, Brent D. Mishler, Hannah L. Owens, Stephen A. Smith, W. Mark Whitten, J. Richard Abbott, Douglas E. Soltis, Robert Guralnick, Pamela S. Soltis   +13 more
doaj  

Multiple maxima of likelihood in phylogenetic trees [PDF]

, 2000
Benny Chor, Michael D. Hendy, Barbara R. Holland, David Penny   +3 more
openalex   +1 more source

Biomolecular Interaction Prediction: The Era of AI

Advanced Science, EarlyView.
This review offers a thorough examination of recent progress in deep learning for predicting biomolecular interactions, including those involving proteins, nucleic acids, and small molecules. It covers data processing strategies, representative model architectures, and evaluation metrics, while highlighting current methodological limitations.
Haoping Wang, Xiangjie Meng, Yang Zhang
wiley   +1 more source

Three-Way Alignment Improves Multiple Sequence Alignment of Highly Diverged Sequences

Algorithms
The standard approach for constructing a phylogenetic tree from a set of sequences consists of two key stages. First, a multiple sequence alignment (MSA) of the sequences is computed.
Mahbubeh Askari Rad, Alibek Kruglikov, Xuhua Xia   +2 more
doaj   +1 more source

Fusang: a framework for phylogenetic tree inference via deep learning. [PDF]

Nucleic Acids Res, 2023
Wang Z, Sun J, Gao Y, Xue Y, Zhang Y, Li K, Zhang W, Zhang C, Zu J, Zhang L.   +9 more
europepmc   +1 more source

Hologenomics Reveals Specialized Dietary Adaptations in the Mengla Snail‐Eating Snake

Advanced Science, EarlyView.
Dietary adaptation studies from a holobiome perspective are scarce beyond mammals. This research reveals how genomic and microbial interactions drive dietary specialization in the Mengla snail‐eating snake, with evidence of gut symbiont convergence between reptiles and mammals.
Chaochao Yan, Xin‐Ning Li, Zhong‐Liang Peng, Wei Wu, Zeng Wang, Zhao‐Ran Zhu, Jia‐Chang Liu, Yao Wang, Jin‐Long Ren, Zhi‐Yi Zhang, Jia‐Tang Li   +10 more
wiley   +1 more source

Stochastic models and descriptive statistics for phylogenetic trees, from Yule to today [PDF]

, 2001
David Aldous
openalex   +1 more source

Sustainable Bioethanol Production from Soft Tissue Waste: Combining Hybrid Hydrolysis, Yeast Fermentation, and Membrane‐Based Separation

Advanced Energy and Sustainability Research, EarlyView.
This study offers a sustainable approach for converting soft tissue waste into bioethanol, promoting the transition from fossil fuels to renewable energy. Employing hybrid hydrolysis and the yeast Hanseniaspora uvarum, a glucose yield of 10.86 g L−1 is attained, with optimal bioethanol production reaching 7.55 g L−1, highlighting the potential of soft ...
Ahmed E. Mansy, Eman A. El Desouky, Ahmed I. Osman, Tarek H. Taha, Mohamed. A. Abu‐Saied, Hamada El‐Gendi, Zhen‐Yu Tian, Ranya A. Amer   +7 more
wiley   +1 more source

Integrating SNVs and CNAs on a phylogenetic tree from single-cell DNA sequencing data. [PDF]

Genome Res, 2023
Zhang L, Bass HW, Irianto J, Mallory X.
europepmc   +1 more source

Building Phylogenetic Trees from DNA Sequence Data: Investigating Polar Bear & Giant Panda Ancestry [PDF]

, 2001
Caroline Alexandra Maier
openalex   +1 more source