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Proceedings of the 12th annual conference companion on Genetic and evolutionary computation, 2010
Bioinformatics techniques are introduced for the analysis of evolutionary search. These techniques are tested on buildable robots evolved in a virtual simulator for a locomotion task. By using bioinformatic visualizations properties of evolutionary search and relatedness between differing robot genotypes and phenotypes can be examined.
Kyle Ira Harrington, Jordan B. Pollack
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Bioinformatics techniques are introduced for the analysis of evolutionary search. These techniques are tested on buildable robots evolved in a virtual simulator for a locomotion task. By using bioinformatic visualizations properties of evolutionary search and relatedness between differing robot genotypes and phenotypes can be examined.
Kyle Ira Harrington, Jordan B. Pollack
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Cladistics, 2021
AbstractPhylogenetic graph structures used in empirical and theoretical analysis have expanded beyond trees to more general directed acyclic graphs including networks and forests. Several methods to reconcile multiple such graphs are presented and discussed here, extending existing consensus and supertree techniques to form a set of phylogenetic ...
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AbstractPhylogenetic graph structures used in empirical and theoretical analysis have expanded beyond trees to more general directed acyclic graphs including networks and forests. Several methods to reconcile multiple such graphs are presented and discussed here, extending existing consensus and supertree techniques to form a set of phylogenetic ...
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2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05), 2006
Phylogenetic reconstruction techniques often produce multiple, competing evolutionary hypotheses. The umbrella term phylogenetic postprocessing encompasses methods that attempt to reconcile the ambiguity. Three classes of phylogenetic postprocessing results are presented.
Nicholas D. Pattengale +1 more
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Phylogenetic reconstruction techniques often produce multiple, competing evolutionary hypotheses. The umbrella term phylogenetic postprocessing encompasses methods that attempt to reconcile the ambiguity. Three classes of phylogenetic postprocessing results are presented.
Nicholas D. Pattengale +1 more
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Trends in Ecology & Evolution, 2001
Species-level phylogenies derived from molecular data provide an indirect record of the speciation events that have led to extant species. This offers enormous potential for investigating the general causes and rates of speciation within clades. To make the most of this potential, we should ideally sample all the species in a higher group, such as a ...
T G., Barraclough, S, Nee
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Species-level phylogenies derived from molecular data provide an indirect record of the speciation events that have led to extant species. This offers enormous potential for investigating the general causes and rates of speciation within clades. To make the most of this potential, we should ideally sample all the species in a higher group, such as a ...
T G., Barraclough, S, Nee
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2008
Phylogenetic profiles describe the presence or absence of a protein in a set of reference genomes. Similarity between profiles is an indicator of functional coupling between gene products: the greater the similarity, the greater the likelihood of proteins sharing membership in the same pathway or cellular system.
Shailesh V, Date +1 more
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Phylogenetic profiles describe the presence or absence of a protein in a set of reference genomes. Similarity between profiles is an indicator of functional coupling between gene products: the greater the similarity, the greater the likelihood of proteins sharing membership in the same pathway or cellular system.
Shailesh V, Date +1 more
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2019
Phylogenetics is an important component of the systems biology approach. Knowledge about evolution of the genus Leishmania is essential to understand various aspects of basic biology of these parasites, such as parasite-host or parasite-vector relationships, biogeography, or epidemiology.
Katrin, Kuhls, Isabel, Mauricio
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Phylogenetics is an important component of the systems biology approach. Knowledge about evolution of the genus Leishmania is essential to understand various aspects of basic biology of these parasites, such as parasite-host or parasite-vector relationships, biogeography, or epidemiology.
Katrin, Kuhls, Isabel, Mauricio
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2017
This chapter introduces phylogenetics with a discussion of DNA, protein sequence information, and the construction of phylogenetic trees. It demonstrates how to use sequence information to categorize how species are related to each other. Phylogenetics is the utilization of sequence information to create evolutionary histories of species.
Jamil Momand +3 more
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This chapter introduces phylogenetics with a discussion of DNA, protein sequence information, and the construction of phylogenetic trees. It demonstrates how to use sequence information to categorize how species are related to each other. Phylogenetics is the utilization of sequence information to create evolutionary histories of species.
Jamil Momand +3 more
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Phylogenetics is not phylogenomics
Cladistics, 2013Leandro C S, Assis, Leandro M, Santos
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PHYLOGENETIC GENOMICS AND GENOMIC PHYLOGENETICS
Biocomputing 2002, 2001SCOTT STANLEY, BENJAMIN A. SALISBURY
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