Ancient and Recent Riverine Gene Flow Contributed to the Adaptive Radiation of Sailfin Silversides in Wallace's Dreampond. [PDF]
De Keyzer ELR +14 more
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Harnessing the Gut Microbes of Low Abundance With a Bent-Capillary-Centrifugal-Driven (BCCD) Microdroplet Method. [PDF]
Jiang MZ +10 more
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Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection. [PDF]
Campos M +3 more
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CAnDI: A New Tool to Investigate Conflict in Homologous Gene Trees and Explain Convergent Trait Evolution. [PDF]
Robertson HM, Walker JF, Moyroud E.
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Dating single gene trees in the age of phylogenomics
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Phylogenomics and the flowering plant tree of life
Journal of Integrative Plant Biology, 2022AbstractThe advances accelerated by next‐generation sequencing and long‐read sequencing technologies continue to provide an impetus for plant phylogenetic study. In the past decade, a large number of phylogenetic studies adopting hundreds to thousands of genes across a wealth of clades have emerged and ushered plant phylogenetics and evolution into a ...
Cen, Guo +6 more
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VERTEBRATE PHYLOGENOMICS: RECONCILED TREES AND GENE DUPLICATIONS [PDF]
Ancient gene duplication events have left many traces in vertebrate genomes. Reconciled trees represent the differences between gene family trees and the species phylogeny those genes are sampled from, allowing us to both infer gene duplication events and estimate a species phylogeny from a sample of gene families.
Roderic D. M. Page, J. A. Cotton
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The Eukaryotic Tree of Life from a Global Phylogenomic Perspective [PDF]
Molecular phylogenetics has revolutionized our knowledge of the eukaryotic tree of life. With the advent of genomics, a new discipline of phylogenetics has emerged: phylogenomics. This method uses large alignments of tens to hundreds of genes to reconstruct evolutionary histories.
Fabien Bürki
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Phylogenomics——An Attractive Avenue to Reconstruct “Tree of Life”
HEREDITAS, 2006The successive start-up of genome project in recent years has far-reaching impact on present phylogenetic studies. A new synthesized discipline--"Phylogenomics", combing genomics with phylogenetics together, is emerging, and becomes an attractive avenue to reconstruct "Tree of Life".
Li, Yu, Ya-Ping, Zhang
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