Results 1 to 10 of about 11,388 (200)

Fungal Phylogenomics [PDF]

Methods in Molecular Biology, 2018
Phylogenomics aims to infer the evolutionary relationships of organisms, and their genomes, genes, and proteins, from genomic data. Understanding the evolution of these components can provide clues about their biological functions.
Robert Riley, László G Nagy, Riley Robert   +2 more
exaly   +2 more sources

Plant phylogenomics based on genome-partitioning strategies: Progress and prospects

Plant Diversity, 2018
The rapid expansion of next-generation sequencing (NGS) has generated a powerful array of approaches to address fundamental questions in biology. Several genome-partitioning strategies to sequence selected subsets of the genome have emerged in the fields
Cen Guo, Lian-Ming Gao
exaly   +2 more sources

darencard/reptile-phylogenomics: Initial release of data repository for publication.

, 2023
Data accompanying Card et al.
Daren Card
core   +1 more source

OrthoSelect: a protocol for selecting orthologous groups in phylogenomics [PDF]

, 2009
Background: Phylogenetic studies using expressed sequence tags (EST) are becoming a standard approach to answer evolutionary questions. Such studies are usually based on large sets of newly generated, unannotated, and error-prone EST sequences from ...
Schreiber Fabian, Fabian Schreiber, Morgenstern Burkhard, Erpenbeck Dirk, Pik, Kerstin, Pick, Kerstin, Morgenstern, Burkhard, Kerstin Pick, Schreiber, Fabian, Wörheide, Gert, Erpenbeck, Dirk, Burkhard Morgenstern, Wörheide Gert, Gert Wörheide, Dirk Erpenbeck, Woerheide, Gert, Pick Kerstin   +16 more
core   +1 more source

Phylogenomics and biogeography of the calamoid palms

, 2021
Tropical rainforests are the most diverse terrestrial biome, but their origins remain incompletely understood. Detailed analyses of the temporal and spatial context of the evolution of old and species-rich tropical rainforest lineages have potential to ...
Kuhnhäuser, Benedikt Georg
core   +1 more source

Comparative phylogenomics of Streptococcus pneumoniae isolated from invasive disease and nasopharyngeal carriage from West Africans. [PDF]

, 2012
BACKGROUND: We applied comparative phylogenomics (whole genome comparisons of microbes using DNA microarrays combined with Bayesian-based phylogenies) to investigate S.
Hinds Jason, Eric S Donkor, Donkor, ES, Martin Antonio, Stabler Richard A, Wren, BW, Hinds, Jason, Wren, Brendan W, Antonio Martin, Adegbola Richard A, Hinds, J, Antonio, M, Donkor Eric S, Wren Brendan W, Richard A Stabler, Jason Hinds, Adegbola, Richard A, Stabler, RA, Stabler, Richard A, Adegbola, RA, Donkor, Eric S, Antonio, Martin, Richard A Adegbola, Brendan W Wren   +23 more
core   +1 more source

Data pack for a phylogenomics exercise

, 2021
A toy dataset to go through a phylogenomics ...
A. Murat Eren (696829)
core   +1 more source

Datasets used for phylogenomics and genome annotation.

, 2023
Datasets used for phylogenomics and genome annotation.
Elisabet Alacid (3281541), Gemy G. Kaithakottil (17101587), Seanna McTaggart (3421709), Karim Gharbi (432878), Iain C. Macaulay (16458682), Benjamin H. Jenkins (17101584), Neil Hall (12782), David Swarbreck (185462), Sally D. Warring (17101590), Estelle S. Kilias (13242159), Jamie McGowan (6193901), Thomas A. Richards (7313678), James Lipscombe (11861499)   +12 more
core   +1 more source

MISPhyl: Mutual Information Supermatrix Phylogenomics pipeline

, 2022
Classification of species, particularly pathogens are important in understanding mode of infections, their origins and even treatments. The advancement of sequencing technologies has offered a parallel advancement in species classification with the used ...
Tan, Joon Liang, Tok, Pendy
core   +1 more source

PGCP: A comprehensive database of plant genomes for comparative phylogenomics [PDF]

Plant Biotechnology Journal
Xing-Yü Feng, Haoyu Chao, Zhu-Qing Shao   +2 more
exaly   +2 more sources