Results 31 to 40 of about 6,751 (255)

Broadly sampled orthologous groups of eukaryotic proteins for the phylogenetic study of plastid-bearing lineages

BMC Research Notes, 2021
Objectives Identifying orthology relationships among sequences is essential to understand evolution, diversity of life and ancestry among organisms.
Mick Van Vlierberghe, Hervé Philippe, Denis Baurain   +2 more
doaj   +1 more source

Datasets used for phylogenomics and genome annotation.

, 2023
Datasets used for phylogenomics and genome annotation.
Elisabet Alacid (3281541), Gemy G. Kaithakottil (17101587), Seanna McTaggart (3421709), Karim Gharbi (432878), Iain C. Macaulay (16458682), Benjamin H. Jenkins (17101584), Neil Hall (12782), David Swarbreck (185462), Sally D. Warring (17101590), Estelle S. Kilias (13242159), Jamie McGowan (6193901), Thomas A. Richards (7313678), James Lipscombe (11861499)   +12 more
core   +1 more source

A phylogenomic profile of globins [PDF]

BMC Evolutionary Biology, 2006
AbstractBackgroundGlobins occur in all three kingdoms of life: they can be classified into single-domain globins and chimeric globins. The latter comprise the flavohemoglobins with a C-terminal FAD-binding domain and the gene-regulating globin coupled sensors, with variable C-terminal domains.
Vinogradov, S. N., Hoogewijs, D., Bailly, X., Arredondo-Peter, R., Gough, Julian J T, Dewilde, S., Moens, L., Vanfleteren, J. R.   +7 more
openaire   +7 more sources

RNA-Seq and iTRAQ reveal multiple pathways involved in storage root formation and development in sweet potato (Ipomoea batatas L.)

BMC Plant Biology, 2019
Background Sweet potato (Ipomoea batatas L.) is the sixth most important food crop in the world. The formation and development of storage roots in sweet potato is a highly complicated and genetically programmed process. However, the underlying mechanisms
Tingting Dong, Mingku Zhu, Jiawen Yu, Rongpeng Han, Cheng Tang, Tao Xu, Jingran Liu, Zongyun Li   +7 more
doaj   +1 more source

MISPhyl: Mutual Information Supermatrix Phylogenomics pipeline

, 2022
Classification of species, particularly pathogens are important in understanding mode of infections, their origins and even treatments. The advancement of sequencing technologies has offered a parallel advancement in species classification with the used ...
Tan, Joon Liang, Tok, Pendy
core   +1 more source

The complete mitochondrial genome of a freshwater mussel Nodularia douglasiae (Bivalvia: Unionidae)

Mitochondrial DNA. Part B. Resources, 2018
The circular F-type mitochondrial genome (15,761 bp) was completely sequenced for a Korean freshwater mussel Nodularia douglasiae (synonym Unio douglasiae; Unionidae, Unionida, Bivalvia).
Seung Hyun Cha, Jin Hee Lee, Eun Hwa Choi, Kuem Hee Jang, Young Jin Lim, Sang Gi Kim, Shi Hyun Ryu, Young Sup Lee, Ui Wook Hwang   +8 more
doaj   +1 more source

Identification and Functional Characterization of Plant MiRNA Under Salt Stress Shed Light on Salinity Resistance Improvement Through MiRNA Manipulation in Crops

Frontiers in Plant Science, 2021
Salinity, as a major environmental stressor, limits plant growth, development, and crop yield remarkably. However, plants evolve their own defense systems in response to salt stress.
Tao Xu, Long Zhang, Zhengmei Yang, Zhengmei Yang, Yiliang Wei, Tingting Dong   +5 more
doaj   +1 more source

An annotated checklist of grasshoppers (Orthoptera, Acridoidea) from Mongolia [PDF]

Biodiversity Data Journal, 2023
Grasshoppers (Acridoidea, Orthoptera) are the dominant herbivores in grassland ecosystems worldwide. They can increase rangeland productivity by stimulating plant growth and accelerating nutrient cycling.
Enkhtsetseg Gankhuyag, Altanchimeg Dorjsuren, Eun Hwa Choi, Ui Wook Hwang   +3 more
doaj   +3 more sources

Phylogenomics and systematics in Pseudomonas [PDF]

Frontiers in Microbiology, 2015
The genus Pseudomonas currently contains 144 species, making it the genus of Gram-negative bacteria that contains the largest number of species. Currently, multilocus sequence analysis (MLSA) is the preferred method for establishing the phylogeny between species and genera.
Gomila, Margarita, Peña, Arantxa, Mulet, Magdalena, Lalucat, Jorge, García-Valdés, Elena   +4 more
openaire   +4 more sources

The Cyclic AMP Receptor Protein, Crp, Is Required for the Decolorization of Acid Yellow 36 in Shewanella putrefaciens CN32

Frontiers in Microbiology, 2020
Shewanella shows good application potentials in the decolorization and detoxification of azo dye wastewater. However, the molecular mechanism of decolorization is still lacking. In this study, it was found that Shewanella putrefaciens CN32 exhibited good
Weijie Liu, Ying Chen, Xuge Zhou, Jiawen Liu, Jingrong Zhu, Shiwei Wang, Cong Liu, Di Sun   +7 more
doaj   +1 more source