Results 31 to 40 of about 15,172 (305)

Statistics and Truth in Phylogenomics [PDF]

open access: yesMolecular Biology and Evolution, 2011
Phylogenomics refers to the inference of historical relationships among species using genome-scale sequence data and to the use of phylogenetic analysis to infer protein function in multigene families. With rapidly decreasing sequencing costs, phylogenomics is becoming synonymous with evolutionary analysis of genome-scale and taxonomically densely ...
Sudhir, Kumar   +4 more
openaire   +2 more sources

Broadly sampled orthologous groups of eukaryotic proteins for the phylogenetic study of plastid-bearing lineages

open access: yesBMC Research Notes, 2021
Objectives Identifying orthology relationships among sequences is essential to understand evolution, diversity of life and ancestry among organisms.
Mick Van Vlierberghe   +2 more
doaj   +1 more source

A phylogenomic profile of globins [PDF]

open access: yesBMC Evolutionary Biology, 2006
AbstractBackgroundGlobins occur in all three kingdoms of life: they can be classified into single-domain globins and chimeric globins. The latter comprise the flavohemoglobins with a C-terminal FAD-binding domain and the gene-regulating globin coupled sensors, with variable C-terminal domains.
Vinogradov, S. N.   +7 more
openaire   +7 more sources

RNA-Seq and iTRAQ reveal multiple pathways involved in storage root formation and development in sweet potato (Ipomoea batatas L.)

open access: yesBMC Plant Biology, 2019
Background Sweet potato (Ipomoea batatas L.) is the sixth most important food crop in the world. The formation and development of storage roots in sweet potato is a highly complicated and genetically programmed process. However, the underlying mechanisms
Tingting Dong   +7 more
doaj   +1 more source

Phylogenomics of the family Lachesillidae (Insecta: Psocodea: Psocomorpha)

open access: yes, 2022
Supplementary material and data sets belonging to Phylogenomics of Lachesillidae and sister ...
Alfonso Neri García Aldrete (10878855)   +4 more
core   +1 more source

Identification and Functional Characterization of Plant MiRNA Under Salt Stress Shed Light on Salinity Resistance Improvement Through MiRNA Manipulation in Crops

open access: yesFrontiers in Plant Science, 2021
Salinity, as a major environmental stressor, limits plant growth, development, and crop yield remarkably. However, plants evolve their own defense systems in response to salt stress.
Tao Xu   +5 more
doaj   +1 more source

An annotated checklist of grasshoppers (Orthoptera, Acridoidea) from Mongolia [PDF]

open access: yesBiodiversity Data Journal, 2023
Grasshoppers (Acridoidea, Orthoptera) are the dominant herbivores in grassland ecosystems worldwide. They can increase rangeland productivity by stimulating plant growth and accelerating nutrient cycling.
Enkhtsetseg Gankhuyag   +3 more
doaj   +3 more sources

Phylogenomics and systematics in Pseudomonas [PDF]

open access: yesFrontiers in Microbiology, 2015
The genus Pseudomonas currently contains 144 species, making it the genus of Gram-negative bacteria that contains the largest number of species. Currently, multilocus sequence analysis (MLSA) is the preferred method for establishing the phylogeny between species and genera.
Gomila, Margarita   +4 more
openaire   +4 more sources

The Cyclic AMP Receptor Protein, Crp, Is Required for the Decolorization of Acid Yellow 36 in Shewanella putrefaciens CN32

open access: yesFrontiers in Microbiology, 2020
Shewanella shows good application potentials in the decolorization and detoxification of azo dye wastewater. However, the molecular mechanism of decolorization is still lacking. In this study, it was found that Shewanella putrefaciens CN32 exhibited good
Weijie Liu   +7 more
doaj   +1 more source

MATEdb, a data repository of high-quality metazoan transcriptome assemblies to accelerate phylogenomic studies

open access: yesPeer Community Journal, 2022
With the advent of high throughput sequencing, the amount of genomic data available for animals (Metazoa) species has bloomed over the last decade, especially from transcriptomes due to lower sequencing costs and easier assembling process compared to ...
Fernández, Rosa   +8 more
doaj   +1 more source

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