Results 41 to 50 of about 15,172 (305)

Phylogenomics

open access: yesAnnual Review of Ecology, Evolution, and Systematics, 2005
▪ Abstract  The continuous flow of genomic data is creating unprecedented opportunities for the reconstruction of molecular phylogenies. Access to whole-genome data means that phylogenetic analysis can now be performed at different genomic levels, such as primary sequences and gene order, allowing for reciprocal corroboration of the results.
Philippe, Hervé   +3 more
openaire   +2 more sources

Identification and characterization of archaeal pseudomurein biosynthesis genes through pangenomics

open access: yesmSystems
The peptidoglycan (PG, or murein) is a mesh-like structure, which is made of glycan polymers connected by short peptides and surrounds the cell membrane of nearly all bacterial species.
Valérian Lupo   +7 more
doaj   +1 more source

MIG-Phylogenomics

open access: yes, 2017
<p>Git repository containing the phylogenomic and evolutionary analysis of MIG nematodes.</p> <p>https://github.com/HullUni-bioinformatics/MIG-Phylogenomics 036d2a3</p ...
Szitenberg, Amir (5295250)   +3 more
core   +1 more source

Kinetoplastid Phylogenomics and Evolution

open access: yes, 2022
This Special Issue, Kinetoplastid Phylogenomics and Evolution, unites a series of research and review papers related to kinetoplastid parasites.

core   +1 more source

The complete mitochondrial genome of an endangered triton snail Charonia lampas (Littorinimorpha: Charoniidae) from South Korea

open access: yesMitochondrial DNA. Part B. Resources, 2021
The complete mitochondrial genome of an endangered triton snail Charonia lampas (Littorinimorpha: Charoniidae) from South Korea was determined with the size of 15,330 bp, which contained 13 protein-coding genes, 22 tRNAs, and two rRNAs.
Eun Hwa Choi, Ui Wook Hwang
doaj   +1 more source

The complete mitochondrial genome of the woodwasp Euxiphydria potanini (Hymenoptera, Xiphydrioidea) and phylogenetic implications for symphytans

open access: yesScientific Reports, 2022
The long-necked woodwasp superfamily Xiphydrioidea belongs to the suborder Symphyta (Hymenoptera). Here we newly characterize the complete mitochondrial genome of the South Korean Euxiphydria potanini (Xiphydriidae) using next-generation sequencing: 16 ...
Bia Park, Ui Wook Hwang
doaj   +1 more source

The generated genome-scale gene supermatrix in phylogenomics analyses of Chondrichthyes

open access: yes, 2021
The single copy gene supermatrix generated in the phylogenomics of Chondrichthyes are shown in this dataset.
Shengyong Xu (5989037)   +1 more
core   +1 more source

Transposable Element Dynamics Drive the Genomic Evolution and Phenotypic Diversification of Allotetraploid Common Carp

open access: yesAdvanced Science, EarlyView.
By integrating 516 whole‐genome resequencing datasets and 236 transcriptomes of allotetraploid common carp, this study establishes the first population‐scale atlas of transposable element (TE) variation in teleost species. TE bursts, relaxed purifying selection, and lineage‐specific loss of ancient insertions shape genome evolution and phenotypic ...
Shuimu Hu   +11 more
wiley   +1 more source

Placing very long branch taxa in the plant tree of life: A case study with Dioscoreales mycoheterotrophs

open access: yesAmerican Journal of Botany, EarlyView.
Abstract Premise The inclusion of heterotrophic plants in broader systematic studies is challenging due to substantial morphological modification, gene loss, and accelerated substitution rates following photosynthesis loss. In particular, inclusion of very long branch (VLB) taxa with highly elevated rates may lead to phylogenomic misinference.
Marybel Soto Gomez   +7 more
wiley   +1 more source

Range-wide phylogeography of the flightless steppe beetle Lethrus apterus (Geotrupidae) reveals recent arrival to the Pontic Steppes from the west

open access: yesScientific Reports, 2022
The Eurasian Steppe belt is one of the largest biomes in the Northern Hemisphere. We provide here a range-wide phylogeography of the flightless steppe beetle Lethrus apterus that inhabits the western part of the Steppe belt through the study of ...
Gábor Sramkó   +6 more
doaj   +1 more source

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