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The Mathematics of Phylogenomics [PDF]
, 2004 The grand challenges in biology today are being shaped by powerful high-throughput technologies that have revealed the genomes of many organisms, global expression patterns of genes and detailed information about variation within populations.
Pachter, Lior, Sturmfels, Bernd
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Polyploidy breaks speciation barriers in Australian burrowing frogs Neobatrachus [PDF]
, 2020 Polyploidy has played an important role in evolution across the tree of life but it is still unclear how polyploid lineages may persist after their initial formation.
Booker, William +11 more
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Phylogenomics and analysis of shared genes suggest a single transition to mutualism in Wolbachia of nematodes [PDF]
, 2013 Wolbachia, endosymbiotic bacteria of the order Rickettsiales, are widespread in arthropods but also present in nematodes. In arthropods, A and B supergroup Wolbachia are generally associated with distortion of host reproduction.
Babayan, Simon A. +12 more
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Insect Molecular Biology, 2015 AbstractPhylogenomics, the integration of phylogenetics with genome data, has emerged as a powerful approach to study the evolution and systematics of species. Recently, several studies employing phylogenomic tools have provided better insights into insect evolution.
openaire +2 more sources
Phylogenomic analyses data of the avian phylogenomics project [PDF]
Gigascience, 2015 Abstract Background Determining the evolutionary relationships among the major lineages of extant birds has been one of the biggest challenges in systematic biology. To address this challenge, we assembled or collected the genomes of 48 avian species spanning most orders of birds, including all ...
Jarvis, Erich +26 more
openaire +8 more sources
Next-generation phylogenomics [PDF]
Biology Direct, 2013 Thanks to advances in next-generation technologies, genome sequences are now being generated at breadth (e.g. across environments) and depth (thousands of closely related strains, individuals or samples) unimaginable only a few years ago. Phylogenomics--the study of evolutionary relationships based on comparative analysis of genome-scale data--has so ...
Chan, Cheong Xin, Ragan, Mark A.
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Mitochondrial DNA. Part B. Resources, 2021 The mitochondrial genome of the Endangered freshwater snail Koreoleptoxis nodifila (Caenogastropoda: Semisulcospiridae) from South Korea is determined and characterized in detail. It is 15,737 bp in length being composed of 13 protein-coding genes (PCGs),
Eun Hwa Choi, Na Rae Choi, Ui Wook Hwang
doaj +1 more source
Common lizards break Dollo’s law of irreversibility: genome-wide phylogenomics support a single origin of viviparity and re-evolution of oviparity [PDF]
, 2018 Dollo’s law of irreversibility states that once a complex trait has been lost in evolution, it cannot be regained. It is thought that complex epistatic interactions and developmental constraints impede the re-emergence of such a trait.
Elmer, Kathryn R. +2 more
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BMC Research Notes, 2021 Objectives Identifying orthology relationships among sequences is essential to understand evolution, diversity of life and ancestry among organisms.
Mick Van Vlierberghe +2 more
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Evolutionary relationships in Panicoid grasses based on plastome phylogenomics (Panicoideae; Poaceae) [PDF]
, 2016 Background: Panicoideae are the second largest subfamily in Poaceae (grass family), with 212 genera and approximately 3316 species. Previous studies have begun to reveal relationships within the subfamily, but largely lack resolution and/or robust ...
Burke, Sean V. +9 more
core +2 more sources