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Phylogeography by diffusion on a sphere: whole world phylogeography [PDF]

open access: yesPeerJ, 2016
Background Techniques for reconstructing geographical history along a phylogeny can answer many questions of interest about the geographical origins of species. Bayesian models based on the assumption that taxa move through a diffusion process have found
Remco Bouckaert
doaj   +6 more sources

Multiplex PCR for differentiating Ornithodoros tick vectors in South Africa: Proof of concept [PDF]

open access: yesOnderstepoort Journal of Veterinary Research
African swine fever (ASF) is a severe viral haemorrhagic disease affecting domestic pigs, maintained by ASF virus within an ancient sylvatic cycle involving Ornithodoros ticks that inhabit warthog burrows.
Susan West   +2 more
doaj   +2 more sources

Spatial and temporal phylogeny of border disease virus in pyrenean chamois (Rupicapra p. Pyrenaica) [PDF]

open access: yes, 2016
Border disease virus (BDV) affects a wide range of ruminants worldwide, mainly domestic sheep and goat. Since 2001 several outbreaks of disease associated to BDV infection have been described in Pyrenean chamois (Rupicapra pyrenaica pyrenaica) in Spain ...
Cabezón, Oscar   +11 more
core   +51 more sources

Fine Scale Phylogeography of Urban Western European Hedgehog Erinaceus europaeus in South‐East England [PDF]

open access: yesEcology and Evolution
Preserving genetic diversity within species and populations is an important conservation goal, yet observed genetic structure can be influenced by both contemporary and historical processes. Here, we investigate the phylogeography of the western European
Jessica Turner   +4 more
doaj   +2 more sources

Plant Taxonomy, Systematics and Phylogeography

open access: yesPlants
Plant taxonomy and phylogeny deal with very important problems related to the genetic diversity of populations found in different geographical regions, trying to present the variability of these populations but also to explain their origin.
Jacek Urbaniak, Paweł Kwiatkowski
doaj   +3 more sources

Conservation and Phylogeography of Plants: From the Mediterranean to the Rest of the World

open access: yesDiversity, 2022
During the last decades, phylogeography has transformed the ways to analyze and understand plant diversity and biogeography. The repeated and increasingly detailed articles made from DNA data with phylogeographical procedures and algorithms have ...
Javier Bobo-Pinilla   +4 more
doaj   +1 more source

Phylogeography [PDF]

open access: yesJournal of Biogeography, 2017
This chapter explains the concept of phylogeography which is focused on the principles and processes of the geographical distribution of genealogical lineages. First, it expounds on the molecular markers of phylogeography. It specifically looks at mitochondrial DNA (MtDNA). MtDNA is often the marker of choice as it showcases a relatively simple pattern
Graham Rowe   +2 more
openaire   +2 more sources

Phylogeography [PDF]

open access: yesCurrent Biology, 2005
Phylogeography [1] is a young and fast-growing field that analyses the geographical distribution of genealogical lineages. It grew out of the new techniques of the 1980s that made it possible to determine DNA sequence variation from individuals across a species range, and hence to reconstruct gene genealogies.
Emerson, Brent C., Hewitt, Godfrey M.
openaire   +3 more sources

Phylogeographic triangulation: using predator-prey-parasite interactions to infer population history from partial genetic information. [PDF]

open access: yesPLoS ONE, 2012
Phylogeographic studies, which infer population history and dispersal movements from intra-specific spatial genetic variation, require expensive and time-consuming analyses that are not always feasible, especially in the case of rare or endangered ...
A Márcia Barbosa   +4 more
doaj   +1 more source

A Cost Reduced Variant of Epi-Genotyping by Sequencing for Studying DNA Methylation in Non-model Organisms

open access: yesFrontiers in Plant Science, 2020
Reference-free reduced representation bisulfite sequencing uses enzymatic digestion for reducing genome complexity and allows detection of markers to study DNA methylation of a high number of individuals in natural populations of non-model organisms ...
Olaf Werner   +5 more
doaj   +1 more source

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