Evolution‐guided yeast complementation reveals functional differences in human PSPH variants
Ancient genomes can help guide which human genetic variants are tested experimentally. This study applies that idea to PSPH, a gene involved in serine biosynthesis, and uses high‐throughput yeast complementation to compare variant function. The findings reveal measurable differences among selected alleles and illustrate the value of evolution‐guided ...
Mauricio Campa‐Álvarez +6 more
wiley +1 more source
Depower: An R Package for Simulation-Based Power Analysis of Differential Expression Studies. [PDF]
Klamer B, Yu L.
europepmc +1 more source
Using Pilot Data for Power Analysis of Observational Studies for the Estimation of Dynamic Treatment Regimes. [PDF]
Rose EJ, Moodie EEM, Shortreed S.
europepmc +1 more source
We describe detailed protocols for the purification and preparation of Marchantia polymorpha Auxin Response Factor 2 (MpARF2). This protein is fused to an MBP solubility tag and an mNG fluorescent tag and is purified from Escherichia coli. The presented procedures make it possible to study MpARF2 assemblies, which could arise from phase separation ...
Bas Janssen +5 more
wiley +1 more source
A priori sample size determination and power analysis in metabolic phenotyping and integrative metabolomics: an application framework based on a systematic review of literature. [PDF]
Bragazzi NL +5 more
europepmc +1 more source
Power analysis for cluster randomized trials with continuous coprimary endpoints. [PDF]
Yang S, Moerbeek M, Taljaard M, Li F.
europepmc +1 more source
Heterotropic regulation and negative homotropic cooperativity
We identified a structural module common to some proteins that couple negative cooperativity with heterotropic regulation, two features that rarely coexist. These proteins are ring‐like and present an ordered asymmetry whereby noncontacting subunits are symmetric, and their tertiary structure differs from that of contacting subunits.
Veronica Morea +5 more
wiley +1 more source
EpipwR: efficient power analysis for EWAS with continuous outcomes. [PDF]
Barth J, Reynolds AW.
europepmc +1 more source
Importance of Sample Size Calculation and Power Analysis in Scientific Studies: An Example from the Balkan Medical Journal [PDF]
Süt N, Ajredani M, Koçak Z.
europepmc +1 more source
Comparative assessment of crystallographic and cryo‐EM models in the Protein Data Bank
Raw data obtained by X‐ray crystallography or cryo‐EM result in experimental maps, ultimately fitted by atomic models. Although the physical principles are different, the final results can be viewed, compared, and evaluated in the same way. With cryogenic electron microscopy (cryo‐EM) on track to surpass X‐ray crystallography as the preferred method ...
Alexander Wlodawer +7 more
wiley +1 more source

