Results 121 to 130 of about 5,759,724 (297)
The Shannon Capacity of Graph Powers
IEEE Transactions on Information TheoryFor a graph $G$, its $k$-th graph power $G^k$ is constructed by placing an edge between two vertices if they are within distance $k$. We consider the problem of deriving upper bounds on the Shannon capacity of graph powers by using spectral graph theory and linear optimization methods.
Aida Abiad +2 more
openaire +4 more sources
The extreme vertices of the power graph of a group. [PDF]
Heliyon, 2022 AbuGhneim OA, Abudayah M.
europepmc +1 more source
Heterotropic regulation and negative homotropic cooperativity
FEBS Open Bio, EarlyView.We identified a structural module common to some proteins that couple negative cooperativity with heterotropic regulation, two features that rarely coexist. These proteins are ring‐like and present an ordered asymmetry whereby noncontacting subunits are symmetric, and their tertiary structure differs from that of contacting subunits.
Veronica Morea +5 more
wiley +1 more source
A graph rewriting programming language for graph drawing [PDF]
, 1998 This paper describes Grrr, a prototype visual graph drawing tool. Previously there were no visual languages for programming graph drawing algorithms despite the inherently visual nature of the process.
Rodgers, Peter
core +1 more source
Comparative assessment of crystallographic and cryo‐EM models in the Protein Data Bank
FEBS Open Bio, EarlyView.Raw data obtained by X‐ray crystallography or cryo‐EM result in experimental maps, ultimately fitted by atomic models. Although the physical principles are different, the final results can be viewed, compared, and evaluated in the same way. With cryogenic electron microscopy (cryo‐EM) on track to surpass X‐ray crystallography as the preferred method ...
Alexander Wlodawer +7 more
wiley +1 more source
FEBS Open Bio, EarlyView.Human ABCE1 cannot functionally replace its yeast ortholog. Yeast–human chimera analysis identified NBD1 as a major interspecies barrier. Genetic screening yielded hABCE1 revertants that rescue yeast viability but fail to suppress aberrant translation reinitiation in the 3′ UTR.
Eriko Nakata +3 more
wiley +1 more source
FEBS Open Bio, EarlyView.During the current opioid crisis, the majority of overdose deaths are attributed to ultra‐potent synthetic opioids, such as fentanyl. While fentanyl exerts its action via opioid receptors, we propose that potassium channels in the brain blood vessels may also sense fentanyl.
Shiwani Thapa +4 more
wiley +1 more source
On colorings of graph fractional powers
Discrete Mathematics, 2010 \noindent Let $G$ be a simple graph. For any $k\in N$, the $k-$power of $G$ is a simple graph $G^k$ with vertex set $V(G)$ and edge set $\{xy:d_G(x,y)\leq k\}$ and the $k-$subdivision of $G$ is a simple graph $G^{\frac{1}{k}}$, which is constructed by replacing each edge of $G$ with a path of length $k$.
openaire +3 more sources
Power spectrum signatures of graphs
Applied and Computational Harmonic AnalysisPoint signatures based on the Laplacian operators on graphs, point clouds, and manifolds have become popular tools in machine learning for graphs, clustering, and shape analysis. In this work, we propose a novel point signature, the power spectrum signature, a measure on $\mathbb{R}$ defined as the squared graph Fourier transform of a graph signal ...
Ka Man Yim, Karamatou Yacoubou Djima
openaire +2 more sources
Using fluorescence fluctuation spectroscopy to quantify molecular dynamics within cells
FEBS Open Bio, EarlyView.Microscopy techniques like fluorescence correlation spectroscopy (FCS) and number and brightness analysis (N&B) allow to quantify concentrations, diffusion rates, and oligomerization of fluorescently labeled molecules in the living cell. In this protocol the principles of how to set up these types of experiments are described including calibration ...
Mark A. Hink
wiley +1 more source