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A model of morphogenesis for protein secondary structures
Journal of Theoretical Biology, 1991This paper proposes a model for the expected probability distribution for a certain class of biological structures. In particular, a model is derived for the distribution of lengths of helices, sheets, turns, and coils as a function of the length of the structure divided by the length of the protein it is contained in.
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Improving Protein Secondary-Structure Prediction by Predicting Ends of Secondary-Structure Segments
2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2005Motivated by known preferences for certain amino acids in positions around a-helices, we developed neural network-based predictors of both N and C a-helix ends, which achieved about 88% accuracy. We applied a similar approach for predicting the ends of three types of secondary structure segments.
Uros Midic +2 more
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Structural analysis of protein Secondary Structure by GHT.
2012Structural biology is a branch of life science concerned with the study of the structure of biological macromolecules like proteins. The structure of a protein gives much more insight in its functions than that of its amino acid sequence. Protein structure comparison is important for understanding the evolutionary relationships among proteins ...
Cantoni, Virginio +3 more
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Secondary structure prediction and protein design.
Biochemical Society symposium, 1990For non-homologous proteins, and after cross-validation, the methods reviewed in this article exhibit a probability index (percentage of correctly predicted residues per predicted residues) of 59-65.5% according to the methods employed with a standard deviation of 7% for three conformational states: alpha-helix, beta-strand and coil.
Garnier, Jean +3 more
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BeStSel: Webserver for Secondary Structure and Fold Prediction for Protein CD Spectroscopy
Nucleic Acids Research, 2022Eszter Boros, Frank Wien, József Kardos
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Effect of pH and Urea on the Proteins Secondary Structure at the Water/Air Interface and in Solution
Journal of Colloid and Interface Science, 2021Tobias Guckeisen +2 more
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Protein Secondary Structure Prediction Based on Position-Specific Scoring Matrices
Journal of Molecular Biology, 1999David Tudor Jones
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