Bioinformatic exploration reveals features of tenpIN family of type III toxin-antitoxin systems in bacteria and viruses. [PDF]
Sci RepNadig K, Sandhya S, Singh M.
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Predicting 3D structure and stability of RNA pseudoknots in monovalent and divalent ion solutions [PDF]
, 2018 Ya-Zhou Shi +4 more
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Roles of RNA Structures in the Genome Translation of (+) Sense RNA Viruses. [PDF]
VirusesLu G, Beyene BG, Camacho JM, Koirala D.
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Highly conserved RNA pseudoknots at the gag-pol junction of HIV-1 suggest a novel mechanism of −1 ribosomal frameshifting [PDF]
, 2014 Xiaolan Huang +4 more
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Structural switching dynamically controls the doubly pseudoknotted Rous sarcoma virus-programmed ribosomal frameshifting element. [PDF]
Proc Natl Acad Sci U S AJones CP, Ferré-D'Amaré AR.
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Systematic analysis of cotranscriptional RNA folding using transcription elongation complex display. [PDF]
Nat CommunKelly SL, Strobel EJ.
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Unfolding Intermediate of mRNA Pseudoknot Correlates with Ribosomal Frameshifting [PDF]
, 2018 Kai‐Chun Chang +6 more
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Nucleotide dependency analysis of genomic language models detects functional elements. [PDF]
Nat GenetTomaz da Silva P +7 more
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A Polymer Physics Framework for the Entropy of Arbitrary Pseudoknots [PDF]
, 2019 Ofer Kimchi +3 more
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A divide-and-conquer approach based on deep learning for long RNA secondary structure prediction: Focus on pseudoknots identification. [PDF]
PLoS OneOmnes L +4 more
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