Results 1 to 10 of about 8,352,989 (180)
Atria: an ultra-fast and accurate trimmer for adapter and quality trimming [PDF]
GigaByte, 2021 With advances in next-generation sequencing, adapters attached to reads and low-quality bases directly and implicitly hinder downstream analysis.
Jiacheng Chuan +4 more
doaj +7 more sources
Impact of quality trimming on the efficiency of reads joining and diversity analysis of Illumina paired-end reads in the context of QIIME1 and QIIME2 microbiome analysis frameworks [PDF]
BMC Bioinformatics, 2019 Background To increase the accuracy of microbiome data analysis, solving the technical limitations of the existing sequencing machines is required. Quality trimming is suggested to reduce the effect of the progressive decrease in sequencing quality with ...
Attayeb Mohsen +4 more
doaj +5 more sources
UrQt: an efficient software for the Unsupervised Quality trimming of NGS data. [PDF]
BMC Bioinformatics, 2015 Quality control is a necessary step of any Next Generation Sequencing analysis. Although customary, this step still requires manual interventions to empirically choose tuning parameters according to various quality statistics. Moreover, current quality control procedures that provide a "good quality" data set, are not optimal and discard many ...
Modolo L, Lerat E.
europepmc +5 more sources
Micromachines, 2019 Frequency trimming based on mass and stiffness modification is an important post-fabrication process for micro-shell resonators (MSRs). However, the trimming effects on the quality factor are seldom studied, although they may have great influence on the ...
Kun Lu +6 more
doaj +4 more sources
Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologies [PDF]
Genomics, 2011 8 pages, 1 ...
Yong Kong
exaly +5 more sources
In-Network Video Quality Adaption using Packet Trimming at the Edge
2023 26th Conference on Innovation in Clouds, Internet and Networks and Workshops (ICIN), 2023 This paper describes the effects of running innetwork quality adaption by trimming the packets of layered video streams at the edge. The video stream is transmitted using the BPP transport protocol, which is like UDP, but has been designed to be both amenable to trimming and to provide low-latency and high reliability.
Stuart Clayman +3 more
openaire +3 more sources
Using packet trimming at the edge for in-network video quality adaption
Annals of Telecommunications, 2023 AbstractThis paper describes the effects of running in-network quality adaption by trimming the packets of layered video streams at the edge. The video stream is transmitted using the BPP transport protocol, which is like UDP, but has been designed to be both amenable to trimming and to provide low-latency and high reliability.
Mustafa Tüker +3 more
openaire +5 more sources
DNA sequence quality trimming and vector removal [PDF]
Bioinformatics, 2001 Abstract Motivation: Most sequence comparison methods assume that the data being compared are trustworthy, but this is not the case with raw DNA sequences obtained from automatic sequencing machines. Nevertheless, sequence comparisons need to be done on them in order to remove vector splice sites and contaminants.
Hui-Hsien Chou, Michael H. Holmes
openaire +3 more sources
Acta Agrobotanica, 2020 Melon are one of the most popular fruit commodities, but, despite the demand, its production in Indonesia has declined. One measure that can be used to optimize the quality of melon fruit is to trim off the leaf buds and arrange the position of fruiting ...
Eko Widaryanto +4 more
doaj +2 more sources
AfterQC: automatic filtering, trimming, error removing and quality control for fastq data [PDF]
BMC Bioinformatics, 2017 Some applications, especially those clinical applications requiring high accuracy of sequencing data, usually have to face the troubles caused by unavoidable sequencing errors. Several tools have been proposed to profile the sequencing quality, but few of them can quantify or correct the sequencing errors. This unmet requirement motivated us to develop
Shifu Chen +5 more
openaire +3 more sources