Human Metabolome Reference Database in a Biracial Cohort across the Adult Lifespan [PDF]
Metabolites, 2023 As one of the OMICS in systems biology, metabolomics defines the metabolome and simultaneously quantifies numerous metabolites that are final or intermediate products and effectors of upstream biological processes.
Qu Tian +9 more
doaj +4 more sources
Developing a Reference Database for Typical Body and Organ Growth of the Artificially Reared Pig as a Biomedical Research Model [PDF]
Frontiers in Pediatrics, 2021 Objectives: The pig is a common model utilized to support substantiation of novel bioactive components in infant formula. However, reference ranges for outcomes to determine safety are unclear.
Vinh H. Vu +9 more
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A Reference Database of Standardised Continuous Lumbar Intervertebral Motion Analysis for Conducting Patient-Specific Comparisons [PDF]
Frontiers in Bioengineering and Biotechnology, 2021 Lumbar instability has long been thought of as the failure of lumbar vertebrae to maintain their normal patterns of displacement. However, it is unknown what these patterns consist of.
Alexander Breen +8 more
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PhyloRef: A Semi‐Automated Workflow for eDNA Reference Database Curation via Phylogenetic Anomaly Detection [PDF]
Ecology and EvolutionEnvironmental DNA (eDNA) analysis depends critically on high‐quality reference databases. However, widely used public repositories (e.g., NCBI) frequently suffer from annotation error, species misidentification, and sequence contamination, leading to ...
Yan Mai, Chenhong Li
doaj +2 more sources
MultiTax-human: an extensive and high-resolution human-related full-length 16S rRNA reference database and taxonomy [PDF]
Microbiology SpectrumConsidering that the human microbiota plays a critical role in health and disease, an accurate and high-resolution taxonomic classification is thus essential for meaningful microbiome analysis.
Zhiwei Bao +3 more
doaj +2 more sources
RESCRIPt: Reproducible sequence taxonomy reference database management. [PDF]
PLoS Computational Biology, 2021 Nucleotide sequence and taxonomy reference databases are critical resources for widespread applications including marker-gene and metagenome sequencing for microbiome analysis, diet metabarcoding, and environmental DNA (eDNA) surveys.
Michael S Robeson +6 more
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mSystemsAccurate metagenomic classification relies on comprehensive, up-to-date, and validated reference databases. While the NCBI BLAST Nucleotide (nt) database, encompassing a vast collection of sequences from all domains of life, represents an invaluable ...
Jose Manuel Martí +7 more
doaj +3 more sources
Construction of the Global Reference Atmospheric Profile Database
Remote Sensing, 2023 Atmospheric profiles are important input parameters for atmospheric radiative transfer models and atmospheric parameter inversions. The construction of regionally representative reference atmospheric profiles can provide basic data for global atmospheric
Yuhang Guo +6 more
doaj +3 more sources
A Reference Database of Reptile Images
TaxonomyWhile there are millions of reptile images available online, they are not well organized and not easily findable, accessible, interoperable, or reproducible (FAIR). More importantly, they are not standardized and thus hardly comparable. Here we present a
Peter H. Uetz +4 more
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Food and Waterborne Parasitology, 2022 The International Trichinella Reference Centre (ITRC) is the official laboratory of the International Commission on Trichinellosis, of the World Organization for Animal Health and of the European Union Reference Laboratory for Parasites.
G. Marucci +5 more
doaj +3 more sources