Computing Refinable Integrals - Documentation of the Program - - Version 1.1 -
, 1995 Based on the theory developed in [DM3], a C++ program is described which computes function values and derivatives of refinable functions and integrals of products of refinable functions (called refinable integrals) for up to four factors in the integral ...
Angela Kunoth
core
FEBS Open Bio, EarlyView.Biophysical characterisation shows that NanX, a membrane transport protein from the major facilitator superfamily (MFS), forms both monomers and dimers after purification. AlphaFold modelling and substrate docking provide information on residues likely involved in substrate recognition for NanX and another MFS member, NanT.
Michael C. Newton‐Vesty +13 more
wiley +1 more source
In silico and in vitro exploration of a tyrosinase for biocatalytic production of catechols
FEBS Open Bio, EarlyView.Tyrosinase from Ralstonia pseudosolanacearum is a promising biocatalyst for producing valuable catechols from monophenol substrates. This tyrosinase is uniquely suited to this due to its high monophenolase : diphenolase ratio. We combined in silico docking and in vivo kinetic characterisation of this tyrosinase with 11 industrially relevant monophenols,
James Britton +6 more
wiley +1 more source
A refinable three-parameter equation for phenomenological absorption in quantitative electron microscopy - determining the equation. [PDF]
J Appl CrystallogrNakashima PNH +3 more
europepmc +1 more source
Likelihood-based signal and noise analysis for docking of models into cryo-EM maps. [PDF]
Acta Crystallogr D Struct Biol, 2023 Read RJ +3 more
europepmc +1 more source
Protocol for quantifying miRNA trafficking across the endosomal membrane
FEBS Open Bio, EarlyView.An in vitro protocol measures miRNA uptake into endosomes isolated from mammalian cell extracts, which are free of subcellular contaminants. Performed at 37 °C in the presence of ATP, it ensures the import of single‐stranded miRNA into the endosomal lumen.
Syamantak Ghosh +2 more
wiley +1 more source
Physical interpretation of Stephens' phenomenological parameters for anisotropic microstrain broadening in cubic systems. [PDF]
J Appl CrystallogrBhakar A, Gupta P, Swami MK, Rai SK.
europepmc +1 more source
Comparative assessment of crystallographic and cryo‐EM models in the Protein Data Bank
FEBS Open Bio, EarlyView.Raw data obtained by X‐ray crystallography or cryo‐EM result in experimental maps, ultimately fitted by atomic models. Although the physical principles are different, the final results can be viewed, compared, and evaluated in the same way. With cryogenic electron microscopy (cryo‐EM) on track to surpass X‐ray crystallography as the preferred method ...
Alexander Wlodawer +7 more
wiley +1 more source
Isotopologue-induced structural dynamics of a triazolate metal-organic framework for efficient hydrogen isotope separation. [PDF]
Nat CommunZhang L +9 more
europepmc +1 more source
FEBS Open Bio, EarlyView.In this study, a novel esterase from the thermoacidophilic archaeon Thermoplasma acidophilum was biochemically and structurally characterized. Our results demonstrate that Ta0887 is a highly thermostable esterase that preferentially hydrolyzes p‐nitrophenyl hexanoate and possesses an α‐helical cap domain that likely contributes to its substrate ...
Alejandro Delgado‐Rey +4 more
wiley +1 more source