Results 81 to 90 of about 871,682 (287)

Leveraging Containers for Reproducible Psychological Research

Advances in Methods and Practices in Psychological Science, 2021
Containers have become increasingly popular in computing and software engineering and are gaining traction in scientific research. They allow packaging up all code and dependencies to ensure that analyses run reliably across a range of operating systems ...
Kristina Wiebels, David Moreau
doaj   +1 more source

Sustainable Software Ecosystems for Open Science

, 2013
Sustainable software ecosystems are difficult to build, and require concerted effort, community norms and collaborations. In science it is especially important to establish communities in which faculty, staff, students and open-source professionals work ...
Hanwell, Marcus D., Hoffman, Bill, O'Leary, Patrick, Osterdahl, Katie, Perera, Amitha, Schroeder, Will, Turner, Wes   +6 more
core   +2 more sources

A High‐Sensitivity Circulating Nucleic Acid Sequencing Assay for Assessing Treatment Response to Alectinib in a Pediatric Patient With ALK‐Rearranged Non–Small Cell Lung Cancer

Pediatric Blood &Cancer, EarlyView.
Alberto D. Guerra, Nicholas F. Evageliou, Vandana Batra, Kristen L. Dalton, Stephanie Ortel, Usman Ashraf, Tricia R. Bhatti, Lisa J. States, Lea F. Surrey, Theodore W. Laetsch   +9 more
wiley   +1 more source

Two Faces of NOTCH1 in Childhood Lymphoblastic T‐Cell Neoplasia: Prognostic Divergence of Mutational and Structural Aberrations

Pediatric Blood &Cancer, EarlyView.
ABSTRACT In pediatric patients, T‐cell lymphoblastic lymphoma (T‐LBL) survival exceeds 80%. Relapse remains associated with limited curative options. Frontline treatment is largely extrapolated from T‐cell acute lymphoblastic leukemia (T‐ALL) treatment, reflecting the ongoing debate, whether both entities represent distinct diseases or variants within ...
Marie C. Heider, Amelie Alfert, Marc Hotfilder, Birgit Burkardt, Marcel te Vrugt   +4 more
wiley   +1 more source

Open reproducible scientometric research with Alexandria3k.

PLoS ONE, 2023
Considerable scientific work involves locating, analyzing, systematizing, and synthesizing other publications, often with the help of online scientific publication databases and search engines.
Diomidis Spinellis
doaj   +1 more source

Ethnic Differences in the Association Between SOD2 rs4880 and Hepatotoxicity in Pediatric Acute Lymphoblastic Leukemia: A Report From the REDIAL Consortium

Pediatric Blood &Cancer, EarlyView.
ABSTRACT Treatment‐associated hepatotoxicity (TAH) is a common complication of pediatric acute lymphoblastic leukemia (ALL) treatment, but genetic risk factors remain poorly understood. We evaluated the SOD2 rs4880 variant in 544 children with ALL at Texas Children's Hospital. After adjusting for demographic and clinical covariates, the rs4880 C allele
Emily J. Mason, John P. Woodhouse, Joanna S. Yi, M. Monica Gramatges, Olga A. Taylor, Veronica A. Morales, Shalini Dhamodharan, Marley Roberts, Karen R. Rabin, Philip J. Lupo, Michael E. Scheurer, Van Huynh, Steven D. Mittelman, Etan Orgel, Austin L. Brown   +14 more
wiley   +1 more source

Using GNU Make to Manage the Workflow of Data Analysis Projects

Journal of Statistical Software, 2020
Data analysis projects invariably involve a series of steps such as reading, cleaning, summarizing and plotting data, statistical analysis and reporting.
Peter Baker
doaj   +1 more source

Improving reproducibility in animal research [PDF]

Scientific Reports, 2020
There have been increasingly lively discussions about many published scientific results failing validation by independent studies. This so-called reproducibility crisis has led to particularly strong criticism of methodological weaknesses in animal research.
openaire   +2 more sources

Assessing Cognitive Functioning in Children With Brain Tumors: Interaction of Neighborhood Social Determinants of Health and Neurological Risk

Pediatric Blood &Cancer, EarlyView.
ABSTRACT Background This study investigated how neighborhood‐level social determinants of health (SDOH), including redlining and neurological risk, interact to influence cognitive outcomes in children treated for brain tumors (CTBT). Methods A retrospective chart review of 161 CTBT aged 5–17 was conducted.
Alannah R. Srsich, Manali Zope, Peter M. Fantozzi, Cassie N. Kline, Iris Paltin, Matthew C. Hocking   +5 more
wiley   +1 more source

Ten Simple Rules for Reproducible Research in Jupyter Notebooks

, 2018
Reproducibility of computational studies is a hallmark of scientific methodology. It enables researchers to build with confidence on the methods and findings of others, reuse and extend computational pipelines, and thereby drive scientific progress ...
Altintas, Ilkay, Birmingham, Amanda, Huang, Shih-Cheng, Knight, Rob, Moshiri, Niema, Nguyen, Mai H., Pérez, Fernando, Rose, Peter W., Rosenthal, Sara Brin, Rule, Adam, Zuniga, Cristal   +10 more
core