Rapid SNP discovery and genetic mapping using sequenced RAD markers. [PDF]
PLoS ONE, 2008 Single nucleotide polymorphism (SNP) discovery and genotyping are essential to genetic mapping. There remains a need for a simple, inexpensive platform that allows high-density SNP discovery and genotyping in large populations.
Nathan A Baird +8 more
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Optical Whole-Genome Restriction Mapping as a Tool for Rapidly Distinguishing and Identifying Bacterial Contaminants in Clinical Samples [PDF]
Journal of Clinical and Diagnostic Research, 2015 Introduction: Optical restriction genome mapping is a technology in which a genome is linearized on a surface and digested with specific restriction enzymes, giving an arrangement of the genome with gaps whose order and size are unique for a given ...
Richard R. Chapleau, James C. Baldwin
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Restriction mapping in nanofluidic devices [PDF]
Proceedings of the National Academy of Sciences, 2005 We have performed restriction mapping of DNA molecules using restriction endonucleases in nanochannels with diameters of 100-200 nm. The location of the restriction reaction within the device is controlled by electrophoresis and diffusion of Mg 2+ and EDTA.
Robert, Riehn +5 more
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Methodological landscape in the field of integration site identification of retroviruses and retroviral vectors [PDF]
Frontiers in Bioengineering and BiotechnologyDetailed mapping of viral vector integration sites, including retroviral and particularly lentiviral vectors, is critical for assessing their safety in preclinical and clinical studies.
Konstantin Kochergin-Nikitsky +2 more
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Molecular Mapping of Restriction-Site Associated DNA Markers In Allotetraploid Upland Cotton.
PLoS ONE, 2015 Upland cotton (Gossypium hirsutum L., 2n = 52, AADD) is an allotetraploid, therefore the discovery of single nucleotide polymorphism (SNP) markers is difficult. The recent emergence of genome complexity reduction technologies based on the next-generation
Yangkun Wang +8 more
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The restriction mapping problem revisited
Journal of Computer and System Sciences, 2002 zbMATH Open Web Interface contents unavailable due to conflicting licenses.
Pandurangan, Gopal, Ramesh, H
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In Silico Restriction Enzyme Digests to Minimize Mapping Bias in Genomic Sequencing [PDF]
Molecular Therapy: Methods & Clinical Development, 2017 Jason Roszik +4 more
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A novel method for effectively selecting fragments not associated with restriction sites for whole-genome genotyping [PDF]
BMC BiologyBackground Reduced representation sequencing (RRS) using Restriction site-associated DNA sequencing (RAD-seq) has become a widely adopted method for whole-genome genotyping, owing to its cost-effectiveness and applicability across species.
Peng Chen +9 more
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, 1992 An approach to high-resolution restriction-fragment DNA mapping, known as Multiple-Restriction-Enzyme mapping (MRE mapping), is present. This approach significantly reduces the uncertainty of clone placement by using clone ends to synchronize the position in of clones within different maps, each map being constructed from fragment-length data produced ...
Will Gillett
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Whole-Genome Restriction Mapping by "Subhaploid"-Based RAD Sequencing: An Efficient and Flexible Approach for Physical Mapping and Genome Scaffolding. [PDF]
Genetics, 2017 Dou J +10 more
europepmc +3 more sources