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A Contrastive-Learning-Based Pre-Training Framework for Optical Property Prediction of Low-Data Rhodamines with Interpretable Multitask Graph Neural Networks [PDF]

open access: yesMolecules
Accurate prediction of maximum absorption (λabs) and emission (λemi) wavelengths are essential for the design of high-performance rhodamine probes. However, available rhodamine optical data is extremely limited and heterogeneous, posing challenges for ...
Jiangguo Qiu   +5 more
doaj   +2 more sources

Fluorescent Dyes in Hydrological Tracing: Application Methods, Ecotoxicological Effects, and Safe Application Levels [PDF]

open access: yesJournal of Xenobiotics
Fluorescent dyes are commonly used as tracers in hydrological investigations to quantify transport pathways, residence times, mixing behavior, and connectivity in surface water, groundwater, and coastal systems. Despite their long history of application,
Carlos J. A. Campos   +3 more
doaj   +2 more sources

General Synthetic Method for Si-Fluoresceins and Si-Rhodamines

open access: yesACS Central Science, 2017
Jonathan B Grimm   +2 more
exaly   +2 more sources

In vivo nerve-specificity of rhodamines and Si-rhodamines [PDF]

open access: yesMolecular-Guided Surgery: Molecules, Devices, and Applications VI, 2020
Accidental nerve damage or transection of vital nerve structures remains an unfortunate reality that is often associated with surgery. Despite the existence of nerve-sparing techniques, the success of such procedures is not only complicated by anatomical variance across patients but is also highly dependent on a surgeon's first-hand experience that is ...
Antonio R, Montaño   +5 more
openaire   +2 more sources

Interactions between Rhodamine Dyes and Model Membrane Systems—Insights from Molecular Dynamics Simulations

open access: yesMolecules, 2022
Background: rhodamines are dyes widely used as fluorescent tags in cell imaging, probing of mitochondrial membrane potential, and as P-glycoprotein model substrates.
Nisa Magalhães   +8 more
doaj   +1 more source

Efforts toward PET-Activatable Red-Shifted Silicon Rhodamines and Silicon Pyronine Dyes

open access: yesPharmaceuticals, 2023
Tracers for bimodal optical imaging and positron emission tomography unite multiple advantages in a single molecule. Their tumor-specific uptake can be visualized after their PET activation by radiofluorination via PET/CT or PET/MRI allowing for staging ...
Carsten Sven Kramer   +3 more
doaj   +1 more source

A general highly efficient synthesis of biocompatible rhodamine dyes and probes for live-cell multicolor nanoscopy

open access: yesNature Communications, 2023
Rhodamines are privileged fluorescent dyes for labelling intracellular structures in living cells. Here, the authors present a facile protecting-group-free synthesis permitting generation of a wide range of symmetrical and unsymmetrical 4 ...
Jonas Bucevičius   +6 more
doaj   +1 more source

Radiolabeled Silicon-Rhodamines as Bimodal PET/SPECT-NIR Imaging Agents

open access: yesPharmaceuticals, 2021
Radiolabeled fluorescent dyes are decisive for bimodal imaging as well as highly in demand for nuclear- and optical imaging. Silicon-rhodamines (SiRs) show unique near-infrared (NIR) optical properties, large quantum yields and extinction coefficients as
Thines Kanagasundaram   +6 more
doaj   +1 more source

A General Method to Develop Highly Environmentally Sensitive Fluorescent Probes and AIEgens

open access: yesAdvanced Science, 2022
Environmentally sensitive fluorescent probes (including AIEgens) play pivotal roles in numerous biological studies. Many of these functional materials are developed based on the twisted intramolecular charge transfer (TICT) mechanism.
Rong Miao   +9 more
doaj   +1 more source

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