Communications BiologyWith the increased use of gene expression profiling for personalized oncology, optimized RNA sequencing (RNA-seq) protocols and algorithms are necessary to provide comparable expression measurements between exome capture (EC)-based and poly-A RNA-seq ...
Nikita Kotlov +24 more
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Novel methods for rRNA removal and directional, ligation-free RNA-seq library preparation [PDF]
, 2010 Roy Sooknanan, Jim Pease, Ken Doyle
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Revealing the missing expressed genes beyond the human reference genome by RNA-Seq [PDF]
, 2011 Geng Chen +7 more
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RNA-seq reproducibility of Pseudomonas aeruginosa in laboratory models of cystic fibrosis
Microbiology SpectrumReproducibility is a fundamental expectation in science and enables investigators to have confidence in their research findings and the ability to compare data from disparate sources, but evaluating reproducibility can be elusive. For example, generating
Rebecca P. Duncan +9 more
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NSMAP: A method for spliced isoforms identification and quantification from RNA-Seq [PDF]
, 2011 Zheng Xia +3 more
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Computation for ChIP-seq and RNA-seq studies
, 2009 Shirley Pepke, B Wold, A Mortazavi
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Sensitive gene fusion detection using ambiguously mapping RNA-Seq read pairs [PDF]
, 2011 Marcus Kinsella +4 more
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Using Poisson mixed-effects model to quantify transcript-level gene expression in RNA-Seq [PDF]
, 2011 Ming Hu +4 more
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RNA-Seq Analysis of a Soybean Near-Isogenic Line Carrying Bacterial Leaf Pustule-Resistant and -Susceptible Alleles [PDF]
, 2011 Ki Hyun Kim +7 more
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Intergenic and Repeat Transcription in Human, Chimpanzee and Macaque Brains Measured by RNA-Seq
, 2010 Augix Guohua Xu +14 more
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