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RNA sequencing (RNA-Seq) has emerged as a powerful and versatile tool for the comprehensive analysis of transcriptomes and has been widely used to investigate gene expression, copy number variation, alternative splicing, and novel transcript discovery. This chapter outlines the methodology for conducting short-read RNA-Seq, starting from RNA enrichment
Rong, Hu+3 more
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Rong, Hu+3 more
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The devil in the details of RNA-seq
Nature Biotechnology, 2014Piero Carninci, Anton Kratz
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comparison of microarray and RNA-seq shows a lack of power for RNA-seq
2012International ...
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RNA-seq: interests for research
2015Agronomic models Workshop organized by Eric Pailhoux et Florian Guillou Session 1: Genomics and biotechnology in avian modelAgronomic models Workshop organized by Eric Pailhoux et Florian GuillouSession 1: Genomics and biotechnology in avian ...
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Near-optimal probabilistic RNA-seq quantification
Nature Biotechnology, 2016Páll Melsted+2 more
exaly
STAR: ultrafast universal RNA-seq aligner
Bioinformatics, 2013Alexander Dobin, Thomas R Gingeras
exaly
TopHat: discovering splice junctions with RNA-Seq
Bioinformatics, 2009Lior Pachter, Steven L Salzberg
exaly