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RNA-Seq Data Analysis

RNA-Seq data analysis stands as a vital part of genomics research, turning vast and complex datasets into meaningful biological insights. It is a field marked by rapid evolution and ongoing innovation, necessitating a thorough understanding for anyone seeking to unlock the potential of RNA-Seq data.
James, Li, Rency S, Varghese, Habtom W, Ressom   +2 more
openaire   +2 more sources

Short-Read RNA-Seq

RNA sequencing (RNA-Seq) has emerged as a powerful and versatile tool for the comprehensive analysis of transcriptomes and has been widely used to investigate gene expression, copy number variation, alternative splicing, and novel transcript discovery. This chapter outlines the methodology for conducting short-read RNA-Seq, starting from RNA enrichment
Rong, Hu, Md N, Islam, Rency S, Varghese, Habtom W, Ressom   +3 more
openaire   +2 more sources

The devil in the details of RNA-seq

Nature Biotechnology, 2014
Piero Carninci, Anton Kratz
openaire   +2 more sources

A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors

Nature Medicine, 2020
Michal Slyper, Caroline B M Porter, Orr Ashenberg   +2 more
exaly  

Improved RNA-seq normalization

Nature Genetics, 2022
openaire   +2 more sources

◾ Introduction to RNA-seq

2014
Panu Somervuo, Eija Korpelainen, Mikael Huss, Garry Wong, Jarno Tuimala   +4 more
openaire   +2 more sources

Cross-species RNA-seq for deciphering host–microbe interactions

Nature Reviews Genetics, 2021
Alexander J Westermann, Jörg Vogel
exaly  

Dual RNA-seq of pathogen and host

Nature Reviews Microbiology, 2012
Alexander J Westermann, Jörg Vogel
exaly  

STAR: ultrafast universal RNA-seq aligner

Bioinformatics, 2013
Alexander Dobin, Felix Schlesinger, Philippe Batut   +2 more
exaly  

Full-length RNA-seq from single cells using Smart-seq2

Nature Protocols, 2014
Simone Picelli, Omid R Faridani, Gosta Winberg   +2 more
exaly