Results 11 to 20 of about 851,151 (347)
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
Nature Biotechnology, 2013 Profiling phylogenetic marker genes, such as the 16S rRNA gene, is a key tool for studies of microbial communities but does not provide direct evidence of a community's functional capabilities.
Morgan G I Langille +2 more
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Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis
Nature Communications, 2019 The 16S rRNA gene has been a mainstay of sequence-based bacterial analysis for decades. However, high-throughput sequencing of the full gene has only recently become a realistic prospect.
Jethro S Johnson +2 more
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Nucleic Acids Research, 2012 The interrogation of genetic markers in environmental meta-barcoding studies is currently seriously hindered by the lack of taxonomically curated reference data sets for the targeted genes.
Laure Guillou +2 more
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The human 18S rRNA m6A methyltransferase METTL5 is stabilized by TRMT112
Nucleic Acids Research, 2019 N6-methyladenosine (m6A) has recently been found abundantly on messenger RNA and shown to regulate most steps of mRNA metabolism. Several important m6A methyltransferases have been described functionally and structurally, but the enzymes responsible for ...
Felix G M Ernst +2 more
exaly +2 more sources
Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data
Bioinformatics, 2015 Motivation: The characterization of phylogenetic and functional diversity is a key element in the analysis of microbial communities. Amplicon-based sequencing of marker genes, such as 16S rRNA, is a powerful tool for assessing and comparing the structure
Bernd Wemheuer, Rolf Daniel
exaly +2 more sources
Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
Applied and Environmental Microbiology, 2007 Qiong Wang +2 more
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Species Identification and Profiling of Complex Microbial Communities Using Shotgun Illumina Sequencing of 16S rRNA Amplicon Sequences [PDF]
, 2013 The high throughput and cost-effectiveness afforded by short-read sequencing technologies, in principle, enable researchers to perform 16S rRNA profiling of complex microbial communities at unprecedented depth and resolution. Existing Illumina sequencing
Hibberd, Martin Lloyd +7 more
core +8 more sources
Compilation of 5S rRNA and 5S rRNA gene sequences [PDF]
Nucleic Acids Research, 1997 The compilation of 5S rRNA and 5S rRNA gene nucleotide sequences as of 30 September 1996, contains a total of 1661 primary structures of 5S rRNAs or their genes, which is an increase of 928 new sequence entries over the last compilation. It covers sequences from 54 archaea, 449 eubacteria, 34 plastids, nine mitochondria and 430 eukaryotes. The databank
T, Specht +4 more
openaire +2 more sources