Results 21 to 30 of about 582,607 (300)
Scientific Reports, 2021 In this paper we compared taxonomic results obtained by metataxonomics (16S rRNA gene sequencing) and metagenomics (whole shotgun metagenomic sequencing) to investigate their reliability for bacteria profiling, studying the chicken gut as a model system.
F. Durazzi +5 more
semanticscholar +1 more source
Veterinární Medicína, 2019 The poor state of health and increased mortality rate of young roe deer, as reported by South Moravian hunters, caused by the increasing numbers of adult nematodes in the lungs of roe deer prompted us to identify the parasites using a combination of ...
Jana Jurankova +3 more
doaj +1 more source
International Journal of Systematic and Evolutionary Microbiology, 2017 The recent advent of DNA sequencing technologies facilitates the use of genome sequencing data that provide means for more informative and precise classification and identification of members of the Bacteria and Archaea.
Seok-Hwan Yoon +6 more
semanticscholar +1 more source
Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing
Msphere, 2021 In 16S rRNA gene sequencing, certain bacterial genera were found to be underrepresented or even missing in taxonomic profiles when using unsuitable primer combinations, outdated reference databases, or inadequate pipeline settings.
Isabel Abellan-Schneyder +7 more
semanticscholar +1 more source
Efficient and specific DNA oligonucleotide rRNA probe-based rRNA removal in Talaromyces marneffei
Mycology, 2022 Emerging evidence showed that lncRNAs play important roles in a wide range of biological processes of fungi such as Saccharomyces cerevisiae. However, systemic identification of lncRNAs in non-model fungi is a challenging task as the efficiency of rRNA ...
Xueyan Hu +3 more
doaj +1 more source
Eukaryotic 5S rRNA biogenesis [PDF]
WIREs RNA, 2011 AbstractThe ribosome is a large complex containing both protein and RNA which must be assembled in a precise manner to allow proper functioning in the critical role of protein synthesis. 5S rRNA is the smallest of the RNA components of the ribosome, and although it has been studied for decades, we still do not have a clear understanding of its function
Martin, Ciganda, Noreen, Williams
openaire +2 more sources
The Importance of Being RNA-est: considering RNA-mediated ribosome plasticity
RNA Biology, 2023 For over 40 years, ribosomes were considered monolithic machines that translate the genetic code indiscriminately. However, over the past two decades, there have been a growing number of studies that suggest ribosomes to have a degree of compositional ...
Christian Trahan, Marlene Oeffinger
doaj +1 more source
Ribosomal Database Project: data and tools for high throughput rRNA analysis
Nucleic Acids Res., 2013 Ribosomal Database Project (RDP; http://rdp.cme.msu.edu/) provides the research community with aligned and annotated rRNA gene sequence data, along with tools to allow researchers to analyze their own rRNA gene sequences in the RDP framework.
J. Cole +9 more
semanticscholar +1 more source
Nature Communications, 2021 Microbial communities are responsible for biological wastewater treatment, but our knowledge of their diversity and function is still poor. Here, we sequence more than 5 million high-quality, full-length 16S rRNA gene sequences from 740 wastewater ...
M. Dueholm +46 more
semanticscholar +1 more source
Nucleic Acids Research, 1998 In this paper we present the updated version of the compilation of 5S rRNA and 5S rDNA nucleotide sequences. It contains 1622 primary structures of 5S rRNAs and 5S rRNA genes from 888 species. These include 58 archaeal, 427 eubacterial, 34 plastid, nine mitochondrial and 1094 eukaryotic DNA or RNA nucleotide sequences.
M, Szymanski +4 more
openaire +2 more sources